Evidence map›Paper›PMID 26948891›Full record

ArticleNeuron2016

The Complete Genome Sequences, Unique Mutational Spectra, and Developmental Potency of Adult Neurons Revealed by Cloning.

Jennifer L Hazen, Gregory G Faust, Alberto R Rodriguez, William C Ferguson, Svetlana Shumilina, Royden A Clark, Michael J Boland, Greg Martin, Pavel Chubukov, Rachel K Tsunemoto and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 1 pooled it
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 1 synthesis or guideline pooled it, 93 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. What sets the mutation rate of a cell type in an animal species?bioRxiv : the preprint server for biology · 2025
    Article
  6. Review
  7. DNA polymerase β suppresses somatic indels at CpG dinucleotides in developing cortical neurons.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Brain Somatic Mutation in Aging and Alzheimer's Disease.Annual review of genomics and human genetics · 2021
    Review
  16. Replication-independent instability of Friedreich's ataxia GAA repeats during chronological aging.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Jennifer L Hazen *Department of Molecular and Cellular Neuroscience, The Scripps Research Institute, 10550 N Torrey Pines Road, La Jolla CA 92037, USA.
Gregory G Faust *Department of Biochemistry and Molecular Genetics, 1340 Jefferson Park Ave, University of Virginia School of Medicine, Charlottesville, VA 22901, USA.
Alberto R RodriguezMouse Genetics Core Facility, The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, CA 92037, USA.
William C FergusonDepartment of Molecular and Cellular Neuroscience, The Scripps Research Institute, 10550 N Torrey Pines Road, La Jolla CA 92037, USA.
Svetlana ShumilinaDepartment of Biochemistry and Molecular Genetics, 1340 Jefferson Park Ave, University of Virginia School of Medicine, Charlottesville, VA 22901, USA.
Royden A ClarkDepartment of Biochemistry and Molecular Genetics, 1340 Jefferson Park Ave, University of Virginia School of Medicine, Charlottesville, VA 22901, USA.
Michael J BolandDepartment of Molecular and Cellular Neuroscience, The Scripps Research Institute, 10550 N Torrey Pines Road, La Jolla CA 92037, USA.
Greg MartinMouse Genetics Core Facility, The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, CA 92037, USA.
Pavel ChubukovDepartment of Molecular and Cellular Neuroscience, The Scripps Research Institute, 10550 N Torrey Pines Road, La Jolla CA 92037, USA.
Rachel K TsunemotoDepartment of Molecular and Cellular Neuroscience, The Scripps Research Institute, 10550 N Torrey Pines Road, La Jolla CA 92037, USA.
Ali TorkamaniDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, CA 92037, USA.
Sergey KupriyanovMouse Genetics Core Facility, The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, CA 92037, USA.
Ira M HallMcDonnell Genome Institute, Washington University School of Medicine, 4444 Forest Park Ave, St. Louis, MO 63108, USA.
Kristin K BaldwinDepartment of Molecular and Cellular Neuroscience, The Scripps Research Institute, 10550 N Torrey Pines Road, La Jolla CA 92037, USA.
Scripps Research Institute · USUniversity of Virginia · USUniversity of California, San Diego · USWashington University in St. Louis · US

Funding

Neurosciences Graduate Training ProgramT32NS061847 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Brenda L Bloodgood · 2008 to 2026
$7.7M
Genome-wide investigation of somatic mutation in the developing and aging brainR01MH102698 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI BALDWIN, KRISTIN KAY, HALL, IRA M · 2014 to 2018
$3.4M
The architecture and development of a sensory processing circuit for smellR01DC012592 · NIDCD · SCRIPPS RESEARCH INSTITUTE, THE · PI BALDWIN, KRISTIN KAY · 2012 to 2016
$2.3M
Extent, Origin, and Control of Structural Variation in Mammalian GenomesDP2OD006493 · OD · UNIVERSITY OF VIRGINIA · PI HALL, IRA M · 2009 to 2009
$2.3M
NIDCD NIH HHS DC012592NIDCD NIH HHS R01 DC012592NIH HHS DP2 OD006493NIH HHS DP2OD006493-01NIMH NIH HHS MH102698NIMH NIH HHS R01 MH102698NINDS NIH HHS T32 NS061847
6 · The paper itself

Abstract

Somatic mutation in neurons is linked to neurologic disease and implicated in cell-type diversification. However, the origin, extent, and patterns of genomic mutation in neurons remain unknown. We established a nuclear transfer method to clonally amplify the genomes of neurons from adult mice for whole-genome sequencing. Comprehensive mutation detection and independent validation revealed that individual neurons harbor ∼100 unique mutations from all classes but lack recurrent rearrangements. Most neurons contain at least one gene-disrupting mutation and rare (0-2) mobile element insertions. The frequency and gene bias of neuronal mutations differ from other lineages, potentially due to novel mechanisms governing postmitotic mutation. Fertile mice were cloned from several neurons, establishing the compatibility of mutated adult neuronal genomes with reprogramming to pluripotency and development.

Indexed as

Cloning, MolecularSequence Analysis, DNAAge FactorsAnimalsAnimals, NewbornCadherin Related ProteinsCadherinsCell DivisionDNA Transposable ElementsEmbryo, MammalianFemaleHumansKi-67 AntigenMiceMice, TransgenicMicrosatellite RepeatsCadherin Related ProteinsCadherinsCDHR1 protein, humanDNA Transposable ElementsKi-67 AntigenNerve Tissue Proteins

Identifiers

PMID26948891
PMCPMC4795965
OpenAlexW2288957736

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.