Evidence map›Paper›PMID 26945568›Full record

ArticleBiointerphases2016

Metal-assisted polyatomic SIMS and laser desorption/ionization for enhanced small molecule imaging of bacterial biofilms.

Sage J B Dunham, Troy J Comi, Kyungwon Ko, Bin Li, Nameera F Baig, Nydia Morales-Soto, Joshua D Shrout, Paul W Bohn, Jonathan V Sweedler

Open access · greenAbstract read
In one paragraph

Article in Biointerphases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Molecular imaging of bacterial biofilms-a systematic review.Critical reviews in microbiology · 2024
    Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Gold-Assisted Molecular Imaging of Organic Tissue by MeV Secondary Ion Mass Spectrometry.Journal of the American Society for Mass Spectrometry · 2023
    Article
  7. ToF-SIMS Depth Profiling of Metal, Metal Oxide, and Alloy Multilayers in Atmospheres of HJournal of the American Society for Mass Spectrometry · 2022
    Article
  8. Article
  9. Article
  10. Spatiotemporal Dynamics of Molecular Messaging in Bacterial Co-Cultures Studied by Multimodal Chemical Imaging.Proceedings of SPIE--the International Society for Optical Engineering · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Sage J B DunhamDepartment of Chemistry and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
Troy J ComiDepartment of Chemistry and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
Kyungwon KoDepartment of Chemistry and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
Bin LiDepartment of Chemistry and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
Nameera F BaigDepartment of Chemistry and Biochemistry and Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, Indiana 46556.
Nydia Morales-SotoDepartment of Civil and Environmental Engineering and Earth Sciences and Department of Biological Sciences, University of Notre Dame, Notre Dame, Indiana 46556 and Eck Institute for Global Health, University of Notre Dame, Notre Dame, Indiana 46556.
Joshua D ShroutDepartment of Civil and Environmental Engineering and Earth Sciences and Department of Biological Sciences, University of Notre Dame, Notre Dame, Indiana 46556 and Eck Institute for Global Health, University of Notre Dame, Notre Dame, Indiana 46556.
Paul W BohnDepartment of Chemistry and Biochemistry and Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, Indiana 46556.
Jonathan V SweedlerDepartment of Chemistry and Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801.
University of Illinois Urbana-Champaign · USUniversity of Notre Dame · US

Funding

Training Program in Chemistry-Interface with BiologyT32GM070421 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HERGENROTHER, PAUL · 2005 to 2019
$5.4M
Characterization of Biofilms by Correlated Mass Spectrometric and Raman ImagingR01AI113219 · NIAID · UNIVERSITY OF NOTRE DAME · PI SHROUT, JOSHUA · 2014 to 2023
$4.7M
NIAID NIH HHS R01 AI113219NIAID NIH HHS R01AI113219NIGMS NIH HHS T32 GM070421NIGMS NIH HHS T32 GM70421
6 · The paper itself

Abstract

Mass spectrometry imaging (MSI) has become an important analytical tool for many sectors of science and medicine. As the application of MSI expands into new areas of inquiry, existing methodologies must be adapted and improved to meet emerging challenges. Particularly salient is the need for small molecule imaging methods that are compatible with complex multicomponent systems, a challenge that is amplified by the effects of analyte migration and matrix interference. With a focus on microbial biofilms from the opportunistic pathogen Pseudomonas aeruginosa, the relative advantages of two established microprobe-based MSI techniques-polyatomic secondary ion mass spectrometry (SIMS) and laser desorption/ionization-are compared, with emphasis on exploring the effect of surface metallization on small molecule imaging. A combination of qualitative image comparison and multivariate statistical analysis demonstrates that sputtering microbial biofilms with a 2.5 nm layer of gold selectively enhances C60-SIMS ionization for several molecular classes including rhamnolipids and 2-alkyl-quinolones. Metallization also leads to the reduction of in-source fragmentation and subsequent ionization of media-specific background polymers, which improves spectral purity and image quality. These findings show that the influence of metallization upon ionization is strongly dependent on both the surface architecture and the analyte class, and further demonstrate that metal-assisted C60-SIMS is a viable method for small molecule imaging of intact molecular ions in complex biological systems.

Indexed as

BiofilmsMetalsOptical ImagingPseudomonas aeruginosaSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSpectrometry, Mass, Secondary IonMetals

Identifiers

PMID26945568
PMCPMC4788603
OpenAlexW2289535141

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.