Evidence map›Paper›PMID 26943791›Full record

ArticlePLoS neglected tropical diseases2016

Towards Improving Point-of-Care Diagnosis of Non-malaria Febrile Illness: A Metabolomics Approach.

Saskia Decuypere, Jessica Maltha, Stijn Deborggraeve, Nicholas J W Rattray, Guiraud Issa, Kaboré Bérenger, Palpouguini Lompo, Marc C Tahita, Thusitha Ruspasinghe, Malcolm McConville and 4 more

Registry-linked trialOpen access · goldAbstract readEvaluation Study
In one paragraph

Article in PLoS neglected tropical diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05085158 (Pathogen Detection in HIV-infected Children and Adolescents With Non-malarial Febrile Illnesses Using Metagenomic Next-generation Sequencing Approach in Uganda), which is not on this map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05085158 unknown statusnot on this mapstarted 2023, after this paper: background citation

Pathogen Detection in HIV-infected Children and Adolescents With Non-malarial Febrile Illnesses Using Metagenomic Next-generation Sequencing Approach in Uganda

TypeobservationalSponsorMakerere UniversityRan2023 to 2024Enrolled138ConditionsHIV Infection
3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 54 citations in OpenAlex.

  1. Pooled it
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  3. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 4 countries.

Saskia DecuypereTelethon Kids Institute, University of Western Australia, Perth, Australia.
Jessica MalthaDepartment of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Stijn DeborggraeveDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Nicholas J W RattraySchool of Chemistry, Manchester Institute of Biotechnology, University of Manchester, Manchester, United Kingdom.
Guiraud IssaClinical Research Unit Nanoro-IRSS-CRUN, Nanoro, Burkina Faso.
Kaboré BérengerClinical Research Unit Nanoro-IRSS-CRUN, Nanoro, Burkina Faso.
Palpouguini LompoClinical Research Unit Nanoro-IRSS-CRUN, Nanoro, Burkina Faso.
Marc C TahitaClinical Research Unit Nanoro-IRSS-CRUN, Nanoro, Burkina Faso.
Thusitha RuspasingheMetabolomics Australia and Bio21 Institute of Molecular Sciences and Biotechnology, University of Melbourne, Melbourne, Australia.
Malcolm McConvilleMetabolomics Australia and Bio21 Institute of Molecular Sciences and Biotechnology, University of Melbourne, Melbourne, Australia.
Royston GoodacreSchool of Chemistry, Manchester Institute of Biotechnology, University of Manchester, Manchester, United Kingdom.
Halidou TintoClinical Research Unit Nanoro-IRSS-CRUN, Nanoro, Burkina Faso.
Jan JacobsDepartment of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Jonathan R CarapetisTelethon Kids Institute, University of Western Australia, Perth, Australia.
Institut de Recherche en Sciences de la Santé · BFInstituut voor Tropische Geneeskunde · BEUniversity of Manchester · GBUniversity of Melbourne · AUThe Kids Research Institute Australia · AUUniversity of Western Australia · AUVIB-KU Leuven Center for Cancer Biology · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionNon-malaria febrile illnesses such as bacterial bloodstream infections (BSI) are a leading cause of disease and mortality in the tropics. However, there are no reliable, simple diagnostic tests for identifying BSI or other severe non-malaria febrile illnesses. We hypothesized that different infectious agents responsible for severe febrile illness would impact on the host metabolome in different ways, and investigated the potential of plasma metabolites for diagnosis of non-malaria febrile illness. METHODOLOGY: We conducted a comprehensive mass-spectrometry based metabolomics analysis of the plasma of 61 children with severe febrile illness from a malaria-endemic rural African setting. Metabolite features characteristic for non-malaria febrile illness, BSI, severe anemia and poor clinical outcome were identified by receiver operating curve analysis. PRINCIPAL

findingsThe plasma metabolome profile of malaria and non-malaria patients revealed fundamental differences in host response, including a differential activation of the hypothalamic-pituitary-adrenal axis. A simple corticosteroid signature was a good classifier of severe malaria and non-malaria febrile patients (AUC 0.82, 95% CI: 0.70-0.93). Patients with BSI were characterized by upregulated plasma bile metabolites; a signature of two bile metabolites was estimated to have a sensitivity of 98.1% (95% CI: 80.2-100) and a specificity of 82.9% (95% CI: 54.7-99.9) to detect BSI in children younger than 5 years. This BSI signature demonstrates that host metabolites can have a superior diagnostic sensitivity compared to pathogen-detecting tests to identify infections characterized by low pathogen load such as BSI.

conclusionsThis study demonstrates the potential use of plasma metabolites to identify causality in children with severe febrile illness in malaria-endemic settings.

Indexed as

Point-of-Care SystemsAdolescentAfricaChildChild, PreschoolDiagnostic Tests, RoutineFemaleFever of Unknown OriginHumansInfantInfant, NewbornMaleMass SpectrometryMetabolomicsRural Population

Identifiers

PMID26943791
PMCPMC4778767
OpenAlexW2288750213

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.