Evidence map›Paper›PMID 26942290›Full record

ArticleAmerican journal of human genetics2016

Mosaic Activating Mutations in FGFR1 Cause Encephalocraniocutaneous Lipomatosis.

James T Bennett, Tiong Yang Tan, Diana Alcantara, Martine Tétrault, Andrew E Timms, Dana Jensen, Sarah Collins, Malgorzata J M Nowaczyk, Marjorie J Lindhurst, Katherine M Christensen and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
12.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 107 citations in OpenAlex.

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  10. Pharmacological and Biological Targeting of FGFR1 in Cancer.Current issues in molecular biology · 2024
    Review
  11. Paediatric low-grade glioma: the role of classical pathology in integrated diagnostic practice.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 14 institutions in 9 countries.

James T BennettDepartment of Pediatrics (Genetics), University of Washington, Seattle, WA 98195, USA; Center for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA 98101, USA.
Tiong Yang TanVictorian Clinical Genetics Services, Murdoch Children's Research Institute, Department of Paediatrics, University of Melbourne, Melbourne, VIC 3052, Australia.
Diana AlcantaraGenome Damage and Stability Centre, University of Sussex, Brighton BN19RQ, UK.
Martine TétraultDepartment of Human Genetics, McGill University, Montreal, QC H3A0G4 Canada.
Andrew E TimmsCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98101, USA.
Dana JensenCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA 98101, USA.
Sarah CollinsCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA 98101, USA.
Malgorzata J M NowaczykDepartment of Pathology and Molecular Medicine, McMaster University, Hamilton, ON L8S 4J9, Canada.
Marjorie J LindhurstNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Katherine M ChristensenDepartment of Pediatrics, Cardinal Glennon Children's Medical Center, St. Louis, MO 63104, USA.
Stephen R BraddockDepartment of Pediatrics, Cardinal Glennon Children's Medical Center, St. Louis, MO 63104, USA.
Heather Brandling-BennettDepartments of Pediatrics and Medicine (Dermatology), University of Washington, Seattle, WA 98195, USA.
Raoul C M HennekamDepartment of Pediatrics, Academic Medical Centre, University of Amsterdam, 1105AZ Amsterdam, Netherlands.
Brian ChungDepartment of Paediatrics and Adolescent Medicine, Queen Mary Hospital, University of Hong Kong, 21 Sassoon Road, Hong Kong, China.
Anna LehmanDepartment of Medical Genetics, University of British Columbia, Vancouver, BC V6H3N1, Canada.
John SuMonash University, Eastern Health, Department of Dermatology, Box Hill, VIC 3128, Australia.
SuYuen NgMonash University, Eastern Health, Department of Dermatology, Box Hill, VIC 3128, Australia.
David J AmorVictorian Clinical Genetics Services, Murdoch Children's Research Institute, Department of Paediatrics, University of Melbourne, Melbourne, VIC 3052, Australia.
University of Washington Center for Mendelian Genomics
Care4Rare Canada Consortium
Jacek MajewskiDepartment of Human Genetics, McGill University, Montreal, QC H3A0G4 Canada.
Les G BieseckerNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Kym M BoycottChildren's Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, ON K1H5B2, Canada.
William B DobynsDepartment of Pediatrics (Genetics), University of Washington, Seattle, WA 98195, USA; Center for Integrative Brain Research, Seattle Children's Research Institute, Seattle, WA 98101, USA; Department of Neurology, University of Washington, Seattle, WA 98195, USA.
Mark O'DriscollGenome Damage and Stability Centre, University of Sussex, Brighton BN19RQ, UK. Electronic address: m.o-driscoll@sussex.ac.uk.
Ute MoogInstitute of Human Genetics, Heidelberg University, 69120 Heidelberg, Germany. Electronic address: ute.moog@med.uni-heidelberg.de.
Laura M McDonellChildren's Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, ON K1H5B2, Canada.
University of Washington · USCardinal Glennon Children’s Medical Center · USEastern Health · AUMcGill University · CANational Institutes of Health · USThe University of Melbourne · AUUniversity of Ottawa · CAUniversity of Sussex · GBHeidelberg University · DEMcMaster University · CAQueen Mary Hospital · CNSeattle Children's Hospital · USUniversity of Amsterdam · NLUniversity of British Columbia · CA

Funding

Rare & Mosaic Disorders Molecular ResearchZIAHG200328 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BIESECKER, LESLIE · 2009 to 2025
$26.8M
UW Center for Mendelian GenomicsU54HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, NICKERSON, DEBORAH A · 2012 to 2015
$20.0M
Rare & Mosaic Disorders - Clinical ResearchZIAHG200388 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BIESECKER, LESLIE · 2013 to 2025
$17.3M
UW Center for Mendelian GenomicsUM1HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, LEAL, SUZANNE M · 2016 to 2020
$15.3M
Intellectual and Developmental Disabilities Research CenterU54HD083091 · NICHD · UNIVERSITY OF WASHINGTON · PI GURALNICK, MICHAEL J · 2014 to 2019
$7.9M
Mosaic: post-zygotic mutations in vascular malformationsR01HL130996 · NHLBI · SEATTLE CHILDREN'S HOSPITAL · PI BENNETT, JAMES T · 2016 to 2024
$7.5M
Megalencephaly and segmental brain overgrowth in humansR01NS092772 · NINDS · SEATTLE CHILDREN'S HOSPITAL · PI MILLEN, KATHLEEN JOYCE · 2015 to 2019
$3.3M
Cancer Research UK 15394CIHRIntramural NIH HHSNHGRI NIH HHS U54 HG006493NHGRI NIH HHS U54HG006493NHGRI NIH HHS UM1 HG006493NHLBI NIH HHS R01 HL130996NICHD NIH HHS U54 HD083091NINDS NIH HHS 1R01NS092772NINDS NIH HHS R01 NS092772
6 · The paper itself

Abstract

Encephalocraniocutaneous lipomatosis (ECCL) is a sporadic condition characterized by ocular, cutaneous, and central nervous system anomalies. Key clinical features include a well-demarcated hairless fatty nevus on the scalp, benign ocular tumors, and central nervous system lipomas. Seizures, spasticity, and intellectual disability can be present, although affected individuals without seizures and with normal intellect have also been reported. Given the patchy and asymmetric nature of the malformations, ECCL has been hypothesized to be due to a post-zygotic, mosaic mutation. Despite phenotypic overlap with several other disorders associated with mutations in the RAS-MAPK and PI3K-AKT pathways, the molecular etiology of ECCL remains unknown. Using exome sequencing of DNA from multiple affected tissues from five unrelated individuals with ECCL, we identified two mosaic mutations, c.1638C>A (p.Asn546Lys) and c.1966A>G (p.Lys656Glu) within the tyrosine kinase domain of FGFR1, in two affected individuals each. These two residues are the most commonly mutated residues in FGFR1 in human cancers and are associated primarily with CNS tumors. Targeted resequencing of FGFR1 in multiple tissues from an independent cohort of individuals with ECCL identified one additional individual with a c.1638C>A (p.Asn546Lys) mutation in FGFR1. Functional studies of ECCL fibroblast cell lines show increased levels of phosphorylated FGFRs and phosphorylated FRS2, a direct substrate of FGFR1, as well as constitutive activation of RAS-MAPK signaling. In addition to identifying the molecular etiology of ECCL, our results support the emerging overlap between mosaic developmental disorders and tumorigenesis.

Indexed as

AdolescentCell Line, TumorCentral Nervous System NeoplasmsChild, PreschoolExomeEyeEye DiseasesFemaleHumansInfantLipomatosisMaleMutationMutation, MissenseNeurocutaneous SyndromesPhosphatidylinositol 3-KinasesFGFR1 protein, humanPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktReceptor, Fibroblast Growth Factor, Type 1

Identifiers

PMID26942290
PMCPMC4800051
OpenAlexW2289570353

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.