Evidence map›Paper›PMID 26942101›Full record

ArticleRare diseases (Austin, Tex.)2014

Loss of the tumor suppressor SMARCA4 in small cell carcinoma of the ovary, hypercalcemic type (SCCOHT).

Pilar Ramos, Anthony N Karnezis, William P D Hendricks, Yemin Wang, Waibhav Tembe, Victoria L Zismann, Christophe Legendre, Winnie S Liang, Megan L Russell, David W Craig and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Rare diseases (Austin, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Translational lung cancer research · 2025
    Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. SMARCA4 Loss and Mutated β-Catenin Induce Proliferative Lesions in the Murine Embryonic Cerebellum.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Small-Cell Carcinoma of the Ovary, Hypercalcemic Type-Genetics, New Treatment Targets, and Current Management Guidelines.Clinical cancer research : an official journal of the American Association for Cancer Research · 2020
    Review
  18. Article
  19. The BAF complex in development and disease.Epigenetics & chromatin · 2019
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 3 countries.

Pilar RamosDivision of Integrated Cancer Genomics; Translational Genomics Research Institute (TGen); Phoenix, AZ USA; School of Life Sciences; Arizona State University; Tempe, AZ USA.
Anthony N KarnezisDepartment of Pathology and Laboratory Medicine; The University of British Columbia; Vancouver, BC Canada; Centre for Translational and Applied Genomics; British Columbia Cancer Agency; Vancouver, BC Canada.
William P D HendricksDivision of Integrated Cancer Genomics; Translational Genomics Research Institute (TGen) ; Phoenix, AZ USA.
Yemin WangDepartment of Pathology and Laboratory Medicine; The University of British Columbia; Vancouver, BC Canada; Centre for Translational and Applied Genomics; British Columbia Cancer Agency; Vancouver, BC Canada.
Waibhav TembeCollaborative Bioinformatics Center; Translational Genomics Research Institute (TGen) ; Phoenix, AZ USA.
Victoria L ZismannDivision of Integrated Cancer Genomics; Translational Genomics Research Institute (TGen) ; Phoenix, AZ USA.
Christophe LegendreCollaborative Bioinformatics Center; Translational Genomics Research Institute (TGen) ; Phoenix, AZ USA.
Winnie S LiangDivision of Integrated Cancer Genomics; Translational Genomics Research Institute (TGen) ; Phoenix, AZ USA.
Megan L RussellDivision of Integrated Cancer Genomics; Translational Genomics Research Institute (TGen) ; Phoenix, AZ USA.
David W CraigDivision of Integrated Cancer Genomics; Translational Genomics Research Institute (TGen) ; Phoenix, AZ USA.
John H FarleyDepartment of Obstetrics and Gynecology; Creighton University School of Medicine; St. Joseph's Hospital and Medical Center ; Phoenix, AZ USA.
Bradley J MonkDepartment of Obstetrics and Gynecology; Creighton University School of Medicine; St. Joseph's Hospital and Medical Center ; Phoenix, AZ USA.
Stephen P AnthonyEvergreen Hematology and Oncology ; Spokane, WA USA.
Aleksandar SekulicDivision of Integrated Cancer Genomics; Translational Genomics Research Institute (TGen); Phoenix, AZ USA; Department of Dermatology; Mayo Clinic; Scottsdale, AZ USA.
Heather E CunliffeDepartment of Pathology; Dunedin School of Medicine; University of Otago ; Dunedin, New Zealand.
David G HuntsmanDepartment of Pathology and Laboratory Medicine; The University of British Columbia; Vancouver, BC Canada; Centre for Translational and Applied Genomics; British Columbia Cancer Agency; Vancouver, BC Canada.
Jeffrey M TrentDivision of Integrated Cancer Genomics; Translational Genomics Research Institute (TGen) ; Phoenix, AZ USA.
Translational Genomics Research Institute · USBC Cancer Agency · CAUniversity of Otago · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small cell carcinoma of the ovary, hypercalcemic type (SCCOHT), is a rare and understudied cancer with a dismal prognosis. SCCOHT's infrequency has hindered empirical study of its biology and clinical management. However, we and others have recently identified inactivating mutations in the SWI/SNF chromatin remodeling gene SMARCA4 with concomitant loss of SMARCA4 protein in the majority of SCCOHT tumors.(1-4) Here we summarize these findings and report SMARCA4 status by targeted sequencing and/or immunohistochemistry (IHC) in an additional 12 SCCOHT tumors, 3 matched germlines, and the cell line SCCOHT-1. We also report the identification of a homozygous inactivating mutation in the gene SMARCB1 in one SCCOHT tumor with wild-type SMARCA4, suggesting that SMARCB1 inactivation may also play a role in the pathogenesis of SCCOHT. To date, SMARCA4 mutations and protein loss have been reported in the majority of 69 SCCOHT cases (including 2 cell lines). These data firmly establish SMARCA4 as a tumor suppressor whose loss promotes the development of SCCOHT, setting the stage for rapid advancement in the biological understanding, diagnosis, and treatment of this rare tumor type.

Indexed as

BRG1chromatin remodelingovarian cancersmall cell carcinoma of the ovary hypercalcemic type (SCCOHT)SMARCA4SMARCB1SNF5SWI/SNFtumorigenesis

Identifiers

PMID26942101
PMCPMC4755243
OpenAlexW2118564910

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.