Evidence map›Paper›PMID 26941765›Full record

ReviewFrontiers in plant science2016

RNA Interference for Functional Genomics and Improvement of Cotton (Gossypium sp.).

Ibrokhim Y Abdurakhmonov, Mirzakamol S Ayubov, Khurshida A Ubaydullaeva, Zabardast T Buriev, Shukhrat E Shermatov, Haydarali S Ruziboev, Umid M Shapulatov, Sukumar Saha, Mauricio Ulloa, John Z Yu and 12 more

Abstract readReview
In one paragraph

Review in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Functional Markers for Precision Plant Breeding.International journal of molecular sciences · 2020
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Ibrokhim Y AbdurakhmonovCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Mirzakamol S AyubovCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Khurshida A UbaydullaevaCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Zabardast T BurievCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Shukhrat E ShermatovCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Haydarali S RuziboevCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Umid M ShapulatovCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" AssociationKibray, Uzbekistan; Laboratory of Plant Physiology, Wageningen UniversityWageningen, Netherlands.
Sukumar SahaCrop Science Research Laboratory, United States Department of Agriculture - Agricultural Research Service, Starkville MS, USA.
Mauricio UlloaPlant Stress and Germplasm Development Research, United States Department of Agriculture - Agricultural Research Service, Lubbock TX, USA.
John Z YuCrop Germplasm Research Unit, United States Department of Agriculture - Agricultural Research Service, College Station TX, USA.
Richard G PercyCrop Germplasm Research Unit, United States Department of Agriculture - Agricultural Research Service, College Station TX, USA.
Eric J DevorDepartment of Obstetrics and Gynecology, University of Iowa Carver College of Medicine, Iowa City IA, USA.
Govind C SharmaDepartment of Biological and Environmental Sciences, Alabama A&M University, Normal AL, USA.
Venkateswara R SripathiDepartment of Biological and Environmental Sciences, Alabama A&M University, Normal AL, USA.
Siva P KumpatlaDow AgroSciences LLC, Indianapolis IN, USA.
Alexander van der KrolLaboratory of Plant Physiology, Wageningen University Wageningen, Netherlands.
Hake D KaterAgricultural and Environmental Research, Cary NC, USA.
Khakimdjan KhamidovCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Shavkat I SalikhovCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Johnie N JenkinsCrop Science Research Laboratory, United States Department of Agriculture - Agricultural Research Service, Starkville MS, USA.
Abdusattor AbdukarimovCenter of Genomics and Bioinformatics, Structural and Functional Genomics, Academy of Sciences the Republic of Uzbekistan, Ministry of Agriculture and Water Resources the Republic of Uzbekistan and "Uzpakhtasanoat" Association Kibray, Uzbekistan.
Alan E PepperDepartment of Biology, Texas A&M University, Colleges Station TX, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA interference (RNAi), is a powerful new technology in the discovery of genetic sequence functions, and has become a valuable tool for functional genomics of cotton (Gossypium sp.). The rapid adoption of RNAi has replaced previous antisense technology. RNAi has aided in the discovery of function and biological roles of many key cotton genes involved in fiber development, fertility and somatic embryogenesis, resistance to important biotic and abiotic stresses, and oil and seed quality improvements as well as the key agronomic traits including yield and maturity. Here, we have comparatively reviewed seminal research efforts in previously used antisense approaches and currently applied breakthrough RNAi studies in cotton, analyzing developed RNAi methodologies, achievements, limitations, and future needs in functional characterizations of cotton genes. We also highlighted needed efforts in the development of RNAi-based cotton cultivars, and their safety and risk assessment, small and large-scale field trials, and commercialization.

Indexed as

antisensecotton pest controldisease resistancefiber qualitygene silencingGossypium

Identifiers

PMID26941765
PMCPMC4762190

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.