ArticleFrontiers in plant science2016
Transcriptome-Wide Identification and Expression Profiling of the DOF Transcription Factor Gene Family in Chrysanthemum morifolium.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
38 citing papers in PubMed, 79 citations in OpenAlex.
- ChrysanthemumPlants (Basel, Switzerland) · 2026Article
- Article
- DOF gene family in P. sativum (L.): comprehensive genomic identification, phylogenetic examination, evolutionary growth, and expression analysis.BMC genomics · 2025Article
- Genome-wide identification, expression patterns and functional analysis of TALE (Three Amino-Acid Loop Extension) transcription factors in Arabidopsis thaliana.BMC plant biology · 2025Article
- Genome-Wide Identification and Expression Analysis of the LbDof Transcription Factor Family Genes inPlants (Basel, Switzerland) · 2025Article
- Genome-Wide Identification and Functional Characterization of the Dof Family inInternational journal of molecular sciences · 2025Article
- Multi-Omics Association Analysis of DOF Transcription Factors Involved in the Drought Resistance of Wheat Induced byInternational journal of molecular sciences · 2025Article
- Identification and functional analysis of the Dof transcription factor genes in sugar beet.Journal of plant research · 2025Article
- Wheat endosperm-specific transcription factor TaDOF6 enhances grain development by regulatingFrontiers in plant science · 2025Article
- Cycling DOF factor mediated seasonal regulation of sexual reproduction and cold response is not conserved inPlant direct · 2024Article
- Identification and Characterization of theInternational journal of molecular sciences · 2024Article
- Genome-wide identification and molecular evolution of Dof transcription factors in Cyperus esculentus.BMC genomics · 2024Article
- CmDOF18 positively regulates salinity tolerance in Chrysanthemum morifolium by activating the oxidoreductase system.BMC plant biology · 2024Article
- DNA-Binding with One Finger (Dof) Transcription Factor Gene Family Study Reveals Differential Stress-Responsive Transcription Factors in Contrasting Drought Tolerance Potato Species.International journal of molecular sciences · 2024Article
- Identification of Dof transcription factors inFrontiers in genetics · 2024Article
- Identification and functional analysis of theFrontiers in plant science · 2024Article
- DOF gene family expansion and diversification.Genetics and molecular biology · 2024Article
- DOF transcription factors: Specific regulators of plant biological processes.Frontiers in plant science · 2023Review
- Identification and characterization ofFrontiers in plant science · 2023Article
- Transcriptome-wide expression analysis ofFrontiers in plant science · 2023Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
10 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The family of DNA binding with one finger (DOF) transcription factors is plant specific, and these proteins contain a highly conserved domain (DOF domain) of 50-52 amino acids that includes a C2C2-type zinc finger motif at the N-terminus that is known to function in a number of plant processes. Here, we characterized 20 DOF genes in the important ornamental species chrysanthemum (Chrysanthemum morifolium) based on transcriptomic sequences. Phylogenetic analysis identified one pair of putative orthologous proteins in Arabidopsis and chrysanthemum and six pairs of paralogous proteins in chrysanthemum. Conserved motifs in the DOF proteins shared by Arabidopsis and chrysanthemum were analyzed using MEME. Bioinformatics analysis revealed that 13 CmDOFs could be targeted by 16 miRNA families. Moreover, we used 5' RLM-RACE to map the cleavage sites in CmDOF3, 15, and 21. The expression of these 20 genes in response to phytohormone treatments and abiotic stresses was characterized, and the expression patterns of six pairs of paralogous CmDOF genes were found to completely differ from one another, except for CmDOF6 and CmDOF7. This work will promote our research of the various functions of DOF gene family members in plant hormone and stress responses.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.