Evidence map›Paper›PMID 26940636›Full record

ArticleInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases2016

Molecular detection of bovine Noroviruses in Argentinean dairy calves: Circulation of a tentative new genotype.

Fátima Ferragut, Celina G Vega, Axel Mauroy, Nádia Conceição-Neto, Mark Zeller, Elisabeth Heylen, Enrique Louge Uriarte, Gladys Bilbao, Marina Bok, Jelle Matthijnssens and 3 more

Open access · greenAbstract read
In one paragraph

Article in Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Clinical and Epidemiological Features of Calicivirus Infections in Cattle.Animals : an open access journal from MDPI · 2026
    Review
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  10. Review
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  12. Article
  13. Phylogeny of bovine norovirus in Egypt based on VP2 gene.International journal of veterinary science and medicine · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Fátima FerragutEnteric Viruses Section, Virology Institute, Veterinary and Agronomic Research Centre, National Institute of Agricultural Technology (INTA), Castelar CC25 (CP 1712), Buenos Aires, Argentina.
Celina G VegaEnteric Viruses Section, Virology Institute, Veterinary and Agronomic Research Centre, National Institute of Agricultural Technology (INTA), Castelar CC25 (CP 1712), Buenos Aires, Argentina.
Axel MauroyVeterinary Virology and Animal Viral Diseases, Fundamental and Applied Research for Animal and Health Centre, Faculty of Veterinary Medicine, University of Liège, Liège B-4000, Belgium.
Nádia Conceição-NetoKU Leuven - University of Leuven, Department of Microbiology and Immunology, Rega Institute for Medical Research, Laboratory of Viral Metagenomics, B-3000, Leuven, Belgium.
Mark ZellerKU Leuven - University of Leuven, Department of Microbiology and Immunology, Rega Institute for Medical Research, Laboratory of Viral Metagenomics, B-3000, Leuven, Belgium.
Elisabeth HeylenKU Leuven - University of Leuven, Department of Microbiology and Immunology, Rega Institute for Medical Research, Laboratory of Viral Metagenomics, B-3000, Leuven, Belgium.
Enrique Louge UriarteAnimal Health Section, Animal Production Area, EEA INTA Balcarce, Balcarce CP 7620, Buenos Aires, Argentina.
Gladys BilbaoVeterinary College, UNCPBA, Tandil CP 7000, Buenos Aires, Argentina.
Marina BokEnteric Viruses Section, Virology Institute, Veterinary and Agronomic Research Centre, National Institute of Agricultural Technology (INTA), Castelar CC25 (CP 1712), Buenos Aires, Argentina.
Jelle MatthijnssensKU Leuven - University of Leuven, Department of Microbiology and Immunology, Rega Institute for Medical Research, Laboratory of Viral Metagenomics, B-3000, Leuven, Belgium.
Etienne ThiryVeterinary Virology and Animal Viral Diseases, Fundamental and Applied Research for Animal and Health Centre, Faculty of Veterinary Medicine, University of Liège, Liège B-4000, Belgium.
Alejandra BadaraccoEnteric Viruses Section, Virology Institute, Veterinary and Agronomic Research Centre, National Institute of Agricultural Technology (INTA), Castelar CC25 (CP 1712), Buenos Aires, Argentina.
Viviana ParreñoEnteric Viruses Section, Virology Institute, Veterinary and Agronomic Research Centre, National Institute of Agricultural Technology (INTA), Castelar CC25 (CP 1712), Buenos Aires, Argentina. Electronic address: parreno.viviana@inta.gob.ar.
National Agricultural Technology Institute · ARKU Leuven · BEUniversity of Liège · BERega Institute for Medical Research · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bovine noroviruses are enteric pathogens detected in fecal samples of both diarrheic and non-diarrheic calves from several countries worldwide. However, epidemiological information regarding bovine noroviruses is still lacking for many important cattle producing countries from South America. In this study, three bovine norovirus genogroup III sequences were determined by conventional RT-PCR and Sanger sequencing in feces from diarrheic dairy calves from Argentina (B4836, B4848, and B4881, all collected in 2012). Phylogenetic studies based on a partial coding region for the RNA-dependent RNA polymerase (RdRp, 503 nucleotides) of these three samples suggested that two of them (B4836 and B4881) belong to genotype 2 (GIII.2) while the third one (B4848) was more closely related to genotype 1 (GIII.1) strains. By deep sequencing, the capsid region from two of these strains could be determined. This confirmed the circulation of genotype 1 (B4848) together with the presence of another sequence (B4881) sharing its highest genetic relatedness with genotype 1, but sufficiently distant to constitute a new genotype. This latter strain was shown in silico to be a recombinant: phylogenetic divergence was detected between its RNA-dependent RNA polymerase coding sequence (genotype GIII.2) and its capsid protein coding sequence (genotype GIII.1 or a potential norovirus genotype). According to this data, this strain could be the second genotype GIII.2_GIII.1 bovine norovirus recombinant described in literature worldwide. Further analysis suggested that this strain could even be a potential norovirus GIII genotype, tentatively named GIII.4. The data provides important epidemiological and evolutionary information on bovine noroviruses circulating in South America.

Indexed as

AnimalsArgentinaCaliciviridae InfectionsCapsid ProteinsCattleCattle DiseasesGenotypeHigh-Throughput Nucleotide SequencingNorovirusPhylogenyRNA-Dependent RNA PolymeraseSequence Analysis, RNAViral ProteinsCapsid ProteinsRNA-Dependent RNA PolymeraseViral ProteinsArgentinaBovineDiarrheaGenotypeNorovirusRecombination

Identifiers

PMID26940636
PMCPMC7185671
OpenAlexW2290154231

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.