Evidence map›Paper›PMID 26940624›Full record

ArticleScientific reports2016

HoxD expression in the fin-fold compartment of basal gnathostomes and implications for paired appendage evolution.

Frank J Tulenko, Gaius J Augustus, James L Massey, Seth E Sims, Sylvie Mazan, Marcus C Davis

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The Development of theJournal of developmental biology · 2022
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Developmental constraints on fin diversity.Development, growth & differentiation · 2020
    Review
  13. Article
  14. Article
  15. Expression ofEvoDevo · 2018
    Article
  16. Review
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Frank J TulenkoDepartment of Molecular and Cellular Biology, Kennesaw State University, GA, USA.
Gaius J AugustusDepartment of Molecular and Cellular Biology, Kennesaw State University, GA, USA.
James L MasseyDepartment of Molecular and Cellular Biology, Kennesaw State University, GA, USA.
Seth E SimsDepartment of Molecular and Cellular Biology, Kennesaw State University, GA, USA.
Sylvie MazanCNRS, Sorbonne Universités, UPMC Univ Paris 06, Observatoire Océanologique, UMR7232 Banyuls, France.
Marcus C DavisDepartment of Molecular and Cellular Biology, Kennesaw State University, GA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of Homeobox transcription factors during fin and limb development have been the focus of recent work investigating the evolutionary origin of limb-specific morphologies. Here we characterize the expression of HoxD genes, as well as the cluster-associated genes Evx2 and LNP, in the paddlefish Polyodon spathula, a basal ray-finned fish. Our results demonstrate a collinear pattern of nesting in early fin buds that includes HoxD14, a gene previously thought to be isolated from global Hox regulation. We also show that in both Polyodon and the catshark Scyliorhinus canicula (a representative chondrichthyan) late phase HoxD transcripts are present in cells of the fin-fold and co-localize with And1, a component of the dermal skeleton. These new data support an ancestral role for HoxD genes in patterning the fin-folds of jawed vertebrates, and fuel new hypotheses about the evolution of cluster regulation and the potential downstream differentiation outcomes of distinct HoxD-regulated compartments.

Indexed as

Gene Expression Regulation, DevelopmentalAnimal FinsAnimalsFishesGene Expression ProfilingHomeodomain ProteinsSequence Analysis, DNAHomeodomain Proteins

Identifiers

PMID26940624
PMCPMC4778128

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.