Evidence map›Paper›PMID 26940481›Full record

ReviewClinical pharmacology and therapeutics2016

Complexities of Gut Microbiome Dysbiosis in the Context of HIV Infection and Antiretroviral Therapy.

S X Li, Ajs Armstrong, C P Neff, M Shaffer, C A Lozupone, B E Palmer

Registry-linked trialOpen access · greenAbstract readReview
In one paragraph

Review in Clinical pharmacology and therapeutics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05421286 (Microbiome-based Stratification of Individuals at Risk of HIV-1 Acquisition, Chronic Clinical Complications, Antimicrobial Drug Resistance, and Unresponsiveness to Therapeutic HIV-1 Vaccination), which is not on this map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05421286 active not recruitingnot on this mapstarted 2022, after this paper: background citation

Microbiome-based Stratification of Individuals at Risk of HIV-1 Acquisition, Chronic Clinical Complications, Antimicrobial Drug Resistance, and Unresponsiveness to Therapeutic HIV-1 Vaccination

Typeobservational_patient_registrySponsorRigshospitalet, DenmarkRan2022 to 2025Enrolled991ConditionsHIV-1-infection, Inflammation, AIDS
3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 92 citations in OpenAlex.

  1. Trial
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  17. Profiling of endogenous metabolites and changes in intestinal microbiota distribution after GEN-001 (The Korean journal of physiology & pharmacology : official journal of the Korean Physiological Society and the Korean Society of Pharmacology · 2024
    Article
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

S X LiDepartment of Medicine, University of Colorado Denver, Anschutz Medical Campus, Aurora, Colorado, USA.
Ajs ArmstrongDepartment of Medicine, University of Colorado Denver, Anschutz Medical Campus, Aurora, Colorado, USA.
C P NeffDepartment of Medicine, University of Colorado Denver, Anschutz Medical Campus, Aurora, Colorado, USA.
M ShafferDepartment of Medicine, University of Colorado Denver, Anschutz Medical Campus, Aurora, Colorado, USA.
C A LozuponeDepartment of Medicine, University of Colorado Denver, Anschutz Medical Campus, Aurora, Colorado, USA.
B E PalmerDepartment of Medicine, University of Colorado Denver, Anschutz Medical Campus, Aurora, Colorado, USA.
University of Colorado Anschutz Medical Campus · USUniversity of Colorado Denver · US

Funding

Diet/gut Microbiome Interaction Influence Inflammatory Disease in HIV PatientsR01DK108366 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI CAMPBELL, THOMAS B., LOZUPONE, CATHERINE · 2015 to 2019
$3.0M
Molecular Pathogenesis of Infectious DiseasesT32AI052066 · NIAID · UNIVERSITY OF COLORADO DENVER · PI VAN DYK, LINDA F. · 2002 to 2022
$2.3M
Factors mediating gut microbiota dysbiosis and metabolic disease in HIV patientsR01DK104047 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI LOZUPONE, CATHERINE, PALMER, BRENT E · 2014 to 2018
$2.1M
NIAID NIH HHS T32 AI052066NIDDK NIH HHS R01 DK104047NIDDK NIH HHS R01 DK108366
6 · The paper itself

Abstract

Human immunodeficiency virus (HIV) infection is associated with an altered gut microbiome that is not consistently restored with effective antiretroviral therapy (ART). Interpretation of the specific microbiome changes observed during HIV infection is complicated by factors like population, sample type, and ART-each of which may have dramatic effects on gut bacteria. Understanding how these factors shape the microbiome during HIV infection (which we refer to as the HIV-associated microbiome) is critical for defining its role in HIV disease, and for developing therapies that restore gut health during infection.

Indexed as

Gastrointestinal MicrobiomeAnimalsAnti-HIV AgentsAntiretroviral Therapy, Highly ActiveDysbiosisHIV InfectionsHumansMicrobiotaAnti-HIV Agents

Identifiers

PMID26940481
PMCPMC4927263
OpenAlexW2291509091

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.