Evidence map›Paper›PMID 26937960›Full record

ArticlePloS one2016

Are PECTIN ESTERASE INHIBITOR Genes Involved in Mediating Resistance to Rhynchosporium commune in Barley?

Stephan Marzin, Anja Hanemann, Shailendra Sharma, Götz Hensel, Jochen Kumlehn, Günther Schweizer, Marion S Röder

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
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  13. Article
  14. Characterisation of barley resistance to rhynchosporium on chromosome 6HS.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  15. Resistance to Rhynchosporium commune in a collection of European spring barley germplasm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  16. The Multifaceted Role of Pectin Methylesterase Inhibitors (PMEIs).International journal of molecular sciences · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Stephan MarzinLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Anja HanemannLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Shailendra SharmaLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Götz HenselLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Jochen KumlehnLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Günther SchweizerBayerische Landesanstalt für Landwirtschaft, Freising, Germany.
Marion S RöderLeibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Leibniz Institute of Plant Genetics and Crop Plant Research · DEBavarian State Research Center for Agriculture · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A family of putative PECTIN ESTERASE INHIBITOR (PEI) genes, which were detected in the genomic region co-segregating with the resistance gene Rrs2 against scald caused by Rhynchosporium commune in barley, were characterized and tested for their possible involvement in mediating resistance to the pathogen by complementation and overexpression analysis. The sequences of the respective genes were derived from two BAC contigs originating from the susceptible cultivar 'Morex'. For the genes HvPEI2, HvPEI3, HvPEI4 and HvPEI6, specific haplotypes for 18 resistant and 23 susceptible cultivars were detected after PCR-amplification and haplotype-specific CAPS-markers were developed. None of the tested candidate genes HvPEI2, HvPEI3 and HvPEI4 alone conferred a high resistance level in transgenic over-expression plants, though an improvement of the resistance level was observed especially with OE-lines for gene HvPEI4. These results do not confirm but also do not exclude an involvement of the PEI gene family in the response to the pathogen. A candidate for the resistance gene Rrs2 could not be identified yet. It is possible that Rrs2 is a PEI gene or another type of gene which has not been detected in the susceptible cultivar 'Morex' or the full resistance reaction requires the presence of several PEI genes.

Indexed as

Gene Expression Regulation, PlantGenes, PlantAscomycotaCarboxylic Ester HydrolasesChromosome MappingDisease ResistanceHaplotypesHordeumHost-Pathogen InteractionsMultigene FamilyPhylogenyPlant DiseasesPlants, Genetically ModifiedCarboxylic Ester Hydrolasespectinesterase

Identifiers

PMID26937960
PMCPMC4777559
OpenAlexW2291015181

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.