Evidence map›Paper›PMID 26936955›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Functions for diverse metabolic activities in heterochromatin.

Xue Bessie Su, Lorraine Pillus

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Toward targeted therapeutics for lobular breast cancer.The Journal of clinical investigation · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Proteomic Analysis ofMolecules (Basel, Switzerland) · 2020
    Article
  9. Multiple Forms of Multifunctional Proteins in Health and Disease.Frontiers in cell and developmental biology · 2020
    Review
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Xue Bessie SuSection of Molecular Biology, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093-0347;
Lorraine PillusSection of Molecular Biology, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093-0347; UC San Diego Moores Cancer Center, University of California, San Diego, La Jolla, CA 92093 lpillus@ucsd.edu.
Moores Cancer CenterUniversity of California, San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Growing evidence demonstrates that metabolism and chromatin dynamics are not separate processes but that they functionally intersect in many ways. For example, the lysine biosynthetic enzyme homocitrate synthase was recently shown to have unexpected functions in DNA damage repair, raising the question of whether other amino acid metabolic enzymes participate in chromatin regulation. Using an in silico screen combined with reporter assays, we discovered that a diverse range of metabolic enzymes function in heterochromatin regulation. Extended analysis of the glutamate dehydrogenase 1 (Gdh1) revealed that it regulates silent information regulator complex recruitment to telomeres and ribosomal DNA. Enhanced N-terminal histone H3 proteolysis is observed in GDH1 mutants, consistent with telomeric silencing defects. A conserved catalytic Asp residue is required for Gdh1's functions in telomeric silencing and H3 clipping. Genetic modulation of α-ketoglutarate levels demonstrates a key regulatory role for this metabolite in telomeric silencing. The metabolic activity of glutamate dehydrogenase thus has important and previously unsuspected roles in regulating chromatin-related processes.

Indexed as

Amino Acid SequenceComputer SimulationGene SilencingGlutamate Dehydrogenase (NADP+)HeterochromatinHistonesJumonji Domain-Containing Histone DemethylasesKetoglutaric AcidsMolecular Sequence DataSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSirtuin 2TelomereGDH1 protein, S cerevisiaeGlutamate Dehydrogenase (NADP+)HeterochromatinHistonesJHD2 protein, S cerevisiaeJumonji Domain-Containing Histone DemethylasesKetoglutaric AcidsSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSIR2 protein, S cerevisiaeSirtuin 2epigenetic silencingglutamate dehydrogenasemetabolismSIR complexyeast chromatin

Identifiers

PMID26936955
PMCPMC4801238
OpenAlexW2289757924

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.