Evidence map›Paper›PMID 26936926›Full record

ArticleGenetics2016

A Novel Candidate Gene for Temperature-Dependent Sex Determination in the Common Snapping Turtle.

Anthony L Schroeder, Kelsey J Metzger, Alexandra Miller, Turk Rhen

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
11.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. The life and death of RNA across temperatures.Computational and structural biotechnology journal · 2022
    Review
  17. Article
  18. Article
  19. Review
  20. Sex determination without sex chromosomes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Anthony L SchroederDepartment of Biology, University of North Dakota, Grand Forks, North Dakota 58202.
Kelsey J MetzgerCenter for Learning Innovation, University of Minnesota, Rochester, Minnesota 55904.
Alexandra MillerDepartment of Biology, University of North Dakota, Grand Forks, North Dakota 58202.
Turk RhenDepartment of Biology, University of North Dakota, Grand Forks, North Dakota 58202 turk.rhen@email.und.edu.
University of North Dakota · USUniversity of Minnesota Rochester · US

Funding

Comparative Genomics of Sex Determination in AmniotesR21HD049486 · NICHD · UNIVERSITY OF NORTH DAKOTA · PI RHEN, TURK E · 2005 to 2006
$312k
NICHD NIH HHS R21 HD049486
6 · The paper itself

Abstract

Temperature-dependent sex determination (TSD) was described nearly 50 years ago. Researchers have since identified many genes that display differential expression at male- vs. female-producing temperatures. Yet, it is unclear whether these genes (1) are involved in sex determination per se, (2) are downstream effectors involved in differentiation of ovaries and testes, or (3) are thermo-sensitive but unrelated to gonad development. Here we present multiple lines of evidence linking CIRBP to sex determination in the snapping turtle, Chelydra serpentina We demonstrate significant associations between a single nucleotide polymorphism (SNP) (c63A > C) in CIRBP, transcript levels in embryonic gonads during specification of gonad fate, and sex in hatchlings from a thermal regime that produces mixed sex ratios. The A allele was induced in embryos exposed to a female-producing temperature, while expression of the C allele did not differ between female- and male-producing temperatures. In accord with this pattern of temperature-dependent, allele-specific expression, AA homozygotes were more likely to develop ovaries than AC heterozygotes, which, in turn, were more likely to develop ovaries than CC homozygotes. Multiple regression using SNPs in CIRBP and adjacent loci suggests that c63A > C may be the causal variant or closely linked to it. Differences in CIRBP allele frequencies among turtles from northern Minnesota, southern Minnesota, and Texas reflect small and large-scale latitudinal differences in TSD pattern. Finally, analysis of CIRBP protein localization reveals that CIRBP is in a position to mediate temperature effects on the developing gonads. Together, these studies strongly suggest that CIRBP is involved in determining the fate of the bipotential gonad.

Indexed as

Cold TemperatureAllelesAnimalsFemaleGenetic LociGonadsHomozygoteMalePolymorphism, Single NucleotideRNA-Binding ProteinsSex Determination ProcessesTurtlesRNA-Binding Proteinscold-inducible RNA-binding proteingenetic associationgenetics of sextemperature-dependent sex determination

Identifiers

PMID26936926
PMCPMC4858799
OpenAlexW2288674790

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.