Evidence map›Paper›PMID 26936895›Full record

ArticlePlant physiology2016

Modularity of Conifer Diterpene Resin Acid Biosynthesis: P450 Enzymes of Different CYP720B Clades Use Alternative Substrates and Converge on the Same Products.

Katrin Geisler, Niels Berg Jensen, Macaire M S Yuen, Lina Madilao, Jörg Bohlmann

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In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Plant terpene specialized metabolism: complex networks or simple linear pathways?The Plant journal : for cell and molecular biology · 2023
    Review
  11. Article
  12. Article
  13. Identification and Defensive Characterization ofInternational journal of molecular sciences · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Katrin GeislerMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada V6T 1Z4.ORCID 0000-0002-7630-1868
Niels Berg JensenMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada V6T 1Z4.ORCID 0000-0002-6245-5057
Macaire M S YuenMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada V6T 1Z4.
Lina MadilaoMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada V6T 1Z4.ORCID 0000-0003-4161-2540
Jörg BohlmannMichael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada V6T 1Z4 bohlmann@msl.ubc.ca.
University of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cytochrome P450 enzymes of the CYP720B subfamily play a central role in the biosynthesis of diterpene resin acids (DRAs), which are a major component of the conifer oleoresin defense system. CYP720Bs exist in families of up to a dozen different members in conifer genomes and fall into four different clades (I-IV). Only two CYP720B members, loblolly pine (Pinus taeda) PtCYP720B1 and Sitka spruce (Picea sitchensis) PsCYP720B4, have been characterized previously. Both are multisubstrate and multifunctional clade III enzymes, which catalyze consecutive three-step oxidations in the conversion of diterpene olefins to DRAs. These reactions resemble the sequential diterpene oxidations affording ent-kaurenoic acid from ent-kaurene in gibberellin biosynthesis. Here, we functionally characterized the CYP720B clade I enzymes CYP720B2 and CYP720B12 in three different conifer species, Sitka spruce, lodgepole pine (Pinus contorta), and jack pine (Pinus banksiana), and compared their activities with those of the clade III enzymes CYP720B1 and CYP720B4 of the same species. Unlike the clade III enzymes, clade I enzymes were ultimately found not to be active with diterpene olefins but converted the recently discovered, unstable diterpene synthase product 13-hydroxy-8(14)-abietene. Through alternative routes, CYP720B enzymes of both clades produce some of the same profiles of conifer oleoresin DRAs (abietic acid, neoabietic acid, levopimaric acid, and palustric acid), while clade III enzymes also function in the formation of pimaric acid, isopimaric acid, and sandaracopimaric acid. These results highlight the modularity of the specialized (i.e. secondary) diterpene metabolism, which produces conifer defense metabolites through variable combinations of different diterpene synthase and CYP720B enzymes.

Indexed as

AbietanesAmino Acid SequenceBase SequenceCarboxylic AcidsCloning, MolecularCytochrome P-450 Enzyme SystemDiterpenesDiterpenes, KauraneDNA, ComplementaryDNA, PlantEscherichia coliGas Chromatography-Mass SpectrometryGene ExpressionGibberellinsMicrosomesPhenanthrenesAbietanesabietic acidCarboxylic AcidsCytochrome P-450 Enzyme SystemDiterpenesDiterpenes, KauraneDNA, ComplementaryDNA, PlantGibberellinsisopimaric acidkaurenekaurenoic acidPhenanthrenespimaric acidPlant ProteinsResins, Plantsandaracopimaric acid

Identifiers

PMID26936895
PMCPMC4854711
OpenAlexW2291625402

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.