Evidence map›Paper›PMID 26936154›Full record

ArticleCurrent genetics2016

Identification of the non-ribosomal peptide synthetase responsible for biosynthesis of the potential anti-cancer drug sansalvamide in Fusarium solani.

Patricia Romans-Fuertes, Teis Esben Sondergaard, Manuela Ilse Helga Sandmann, Rasmus Dam Wollenberg, Kristian Fog Nielsen, Frederik T Hansen, Henriette Giese, Ditlev Egeskov Brodersen, Jens Laurids Sørensen

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Article in Current genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  3. Review
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  8. Article
  9. Journal of Cancer · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Biosynthesis of depsipeptides, or Depsi: The peptides with varied generations.Protein science : a publication of the Protein Society · 2020
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Patricia Romans-FuertesDepartment of Molecular Biology and Genetics, NANORIPES Centre for Natural Non-Ribosomal Peptide Synthesis, Aarhus University, Gustav Wieds Vej 10c, 8000, Aarhus C, Denmark.
Teis Esben SondergaardDepartment of Molecular Biology and Genetics, NANORIPES Centre for Natural Non-Ribosomal Peptide Synthesis, Aarhus University, Gustav Wieds Vej 10c, 8000, Aarhus C, Denmark.
Manuela Ilse Helga SandmannDepartment of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220, Aalborg East, Denmark.
Rasmus Dam WollenbergDepartment of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220, Aalborg East, Denmark.
Kristian Fog NielsenDepartment of Systems Biology, Technical University of Denmark, Søltofts Plads, Bygning 221, 2800, Kgs. Lyngby, Denmark.
Frederik T HansenDepartment of Molecular Biology and Genetics, NANORIPES Centre for Natural Non-Ribosomal Peptide Synthesis, Aarhus University, Gustav Wieds Vej 10c, 8000, Aarhus C, Denmark.
Henriette GieseDepartment of Molecular Biology and Genetics, NANORIPES Centre for Natural Non-Ribosomal Peptide Synthesis, Aarhus University, Gustav Wieds Vej 10c, 8000, Aarhus C, Denmark.
Ditlev Egeskov BrodersenDepartment of Molecular Biology and Genetics, NANORIPES Centre for Natural Non-Ribosomal Peptide Synthesis, Aarhus University, Gustav Wieds Vej 10c, 8000, Aarhus C, Denmark.
Jens Laurids SørensenDepartment of Molecular Biology and Genetics, NANORIPES Centre for Natural Non-Ribosomal Peptide Synthesis, Aarhus University, Gustav Wieds Vej 10c, 8000, Aarhus C, Denmark. jls@bio.aau.dk.ORCID http://orcid.org/0000-0002-2392-5343
Aarhus University · DKAalborg University · DKTechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sansalvamide is a cyclic pentadepsipeptide produced by Fusarium solani and has shown promising results as potential anti-cancer drug. The biosynthetic pathway has until now remained unidentified, but here we used an Agrobacterium tumefaciens-mediated transformation (ATMT) approach to generate knockout mutants of two candidate non-ribosomal peptide synthetases (NRPS29 and NRPS30). Comparative studies of secondary metabolites in the two deletion mutants and wild type confirmed the absence of sansalvamide in the NRPS30 deletion mutant, implicating this synthetase in the biosynthetic pathway for sansalvamide. Sansalvamide is structurally related to the cyclic hexadepsipeptide destruxin, which both contain an α-hydroxyisocaproic acid (HICA) unit. A gene cluster responsible for destruxin production has previously been identified in Metarhizium robertsii together with a hypothetical biosynthetic pathway. Using comparative bioinformatic analyses of the catalytic domains in the destruxin and sansalvamide NRPSs, we were able to propose a model for sansalvamide biosynthesis. Orthologues of the gene clusters were also identified in species from several other genera including Acremonium chrysogenum and Trichoderma virens, which suggests that the ability to produce compounds related to destruxin and sansalvamide is widespread.

Indexed as

Antineoplastic AgentsDepsipeptidesFusariumGene Expression Regulation, FungalGenome, FungalMetabolomeMetabolomicsModels, BiologicalMultigene FamilyPeptide SynthasesPhylogenySecondary MetabolismSequence DeletionTranscription, GeneticAntineoplastic AgentsDepsipeptidesPeptide Synthasessansalvamide AAgrobacterium tumefaciens-mediated transformationDestruxinMetarhizium robertsiiNectria haematococcaNRPSSecondary metabolites

Identifiers

PMID26936154
OpenAlexW2290839067

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.