Evidence map›Paper›PMID 26936070›Full record

ArticlePlant molecular biology2016

The transcriptome of NaCl-treated Limonium bicolor leaves reveals the genes controlling salt secretion of salt gland.

Fang Yuan, Ming-Ju Amy Lyu, Bing-Ying Leng, Xin-Guang Zhu, Bao-Shan Wang

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
30.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 136 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. CqHKT1 and CqSOS1 mediate genotype-dependent NaFrontiers in plant science · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Ornamental Plants and Urban Gardening.Plants (Basel, Switzerland) · 2023
    Article
  9. Salt Tolerance ofPlants (Basel, Switzerland) · 2023
    Article
  10. Multi-omics Analysis of YoungPhenomics (Cham, Switzerland) · 2023
    Article
  11. Review
  12. Lb1G04202, an Uncharacterized Protein from RecretohalophyteInternational journal of molecular sciences · 2022
    Article
  13. Article
  14. Article
  15. An uncharacterized geneFrontiers in plant science · 2022
    Article
  16. Article
  17. Molecular Mechanisms of Plant Trichome Development.Frontiers in plant science · 2022
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Fang YuanKey Lab of Plant Stress Research, College of Life Science, Shandong Normal University, Jinan, 250014, Shandong, China.
Ming-Ju Amy LyuCAS Key Laboratory of Computational Biology, CAS-MPG Partner Institute of Computational Biology, Shanghai Institutes for Biological Sciences, Shanghai, 200031, China.
Bing-Ying LengKey Lab of Plant Stress Research, College of Life Science, Shandong Normal University, Jinan, 250014, Shandong, China.
Xin-Guang ZhuCAS Key Laboratory of Computational Biology, CAS-MPG Partner Institute of Computational Biology, Shanghai Institutes for Biological Sciences, Shanghai, 200031, China.
Bao-Shan WangKey Lab of Plant Stress Research, College of Life Science, Shandong Normal University, Jinan, 250014, Shandong, China. bswang@sdnu.edu.cn.
Shandong Normal University · CNShanghai Institutes for Biological Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Limonium bicolor, a typical recretohalophyte that lives in saline environments, excretes excessive salt to the environment through epidermal salt glands to avoid salt stress. The aim of this study was to screen for L. bicolor genes involved in salt secretion by high-throughput RNA sequencing. We established the experimental procedure of salt secretion using detached mature leaves, in which the optimal salt concentration was determined as 200 mM NaCl. The detached salt secretion system combined with Illumina deep sequencing were applied. In total, 27,311 genes were annotated using an L. bicolor database, and 2040 of these genes were differentially expressed, of which 744 were up-regulated and 1260 were down-regulated with the NaCl versus the control treatment. A gene ontology enrichment analysis indicated that genes related to ion transport, vesicles, reactive oxygen species scavenging, the abscisic acid-dependent signaling pathway and transcription factors were found to be highly expressed under NaCl treatment. We found that 102 of these genes were likely to be involved in salt secretion, which was confirmed using salt-secretion mutants. The present study identifies the candidate genes in the L. bicolor salt gland that are highly associated with salt secretion. In addition, a salt-transporting pathway is presented to explain how Na(+) is excreted by the salt gland in L. bicolor. These findings will shed light on the molecular mechanism of salt secretion from the salt glands of plants.

Indexed as

Gene Expression Regulation, PlantGenes, PlantPlant LeavesPlumbaginaceaeSalt ToleranceSalt-Tolerant PlantsSodium ChlorideTranscriptomeSodium ChlorideIllumina sequencingLimonium bicolorRecretohalophyteSalt glandSalt secretion

Identifiers

PMID26936070
OpenAlexW2291763353

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.