Evidence map›Paper›PMID 26934985›Full record

ArticleBMC genomics2016

Thermal reactionomes reveal divergent responses to thermal extremes in warm and cool-climate ant species.

John Stanton-Geddes, Andrew Nguyen, Lacy Chick, James Vincent, Mahesh Vangala, Robert R Dunn, Aaron M Ellison, Nathan J Sanders, Nicholas J Gotelli, Sara Helms Cahan

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  5. DraftPeerJ · 2019
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  8. If these data could talk.Scientific data · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

John Stanton-GeddesDepartment of Biology, University of Vermont, Burlington, VT, 05405, USA. john.stantongeddes.research@gmail.com.
Andrew NguyenDepartment of Biology, University of Vermont, Burlington, VT, 05405, USA.
Lacy ChickDepartment of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, 37996, USA.
James VincentVermont Genetics Network, University of Vermont, Burlington, VT, 05405, USA.
Mahesh VangalaVermont Genetics Network, University of Vermont, Burlington, VT, 05405, USA.
Robert R DunnDepartment of Biological Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Aaron M EllisonHarvard Forest, Harvard University, Petersham, MA, 01336, USA.
Nathan J SandersDepartment of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, 37996, USA.
Nicholas J GotelliDepartment of Biology, University of Vermont, Burlington, VT, 05405, USA.
Sara Helms CahanDepartment of Biology, University of Vermont, Burlington, VT, 05405, USA.
University of Vermont · USHarvard University · USNorth Carolina State University · USUniversity of Copenhagen · DKUniversity of Tennessee at Knoxville · US

Funding

Vermont INBRE Administrative Supplement 2024 AWD 118P20GM103449 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI CHRISTOPHER S FRANCKLYN · 2012 to 2026
$58.4M
NIGMS NIH HHS 8P20GM103449NIGMS NIH HHS P20 GM103449
6 · The paper itself

Abstract

backgroundThe distributions of species and their responses to climate change are in part determined by their thermal tolerances. However, little is known about how thermal tolerance evolves. To test whether evolutionary extension of thermal limits is accomplished through enhanced cellular stress response (enhanced response), constitutively elevated expression of protective genes (genetic assimilation) or a shift from damage resistance to passive mechanisms of thermal stability (tolerance), we conducted an analysis of the reactionome: the reaction norm for all genes in an organism's transcriptome measured across an experimental gradient. We characterized thermal reactionomes of two common ant species in the eastern U.S, the northern cool-climate Aphaenogaster picea and the southern warm-climate Aphaenogaster carolinensis, across 12 temperatures that spanned their entire thermal breadth.

resultsWe found that at least 2 % of all genes changed expression with temperature. The majority of upregulation was specific to exposure to low temperatures. The cool-adapted A. picea induced expression of more genes in response to extreme temperatures than did A. carolinensis, consistent with the enhanced response hypothesis. In contrast, under high temperatures the warm-adapted A. carolinensis downregulated many of the genes upregulated in A. picea, and required more extreme temperatures to induce down-regulation in gene expression, consistent with the tolerance hypothesis. We found no evidence for a trade-off between constitutive and inducible gene expression as predicted by the genetic assimilation hypothesis.

conclusionsThese results suggest that increases in upper thermal limits may require an evolutionary shift in response mechanism away from damage repair toward tolerance and prevention.

Indexed as

Cold TemperatureHot TemperatureTranscriptomeAdaptation, PhysiologicalAnimalsAntsBiological EvolutionClimateGene Expression RegulationGenes, InsectSpecies SpecificityUnited States

Identifiers

PMID26934985
PMCPMC4776372
OpenAlexW2289813185

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.