Evidence map›Paper›PMID 26934647›Full record

ArticleOncotarget2016

APE1-mediated DNA damage repair provides survival advantage for esophageal adenocarcinoma cells in response to acidic bile salts.

Jun Hong, Zheng Chen, Dunfa Peng, Alexander Zaika, Frank Revetta, M Kay Washington, Abbes Belkhiri, Wael El-Rifai

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  9. Antioxidants (Basel, Switzerland) · 2023
    Article
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  15. AnFrontiers in microbiology · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jun HongDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Zheng ChenDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Dunfa PengDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Alexander ZaikaDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Frank RevettaDepartment of Pathology, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
M Kay WashingtonDepartment of Pathology, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Abbes BelkhiriDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Wael El-RifaiDepartment of Surgery, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Vanderbilt University Medical Center · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Understanding and Controlling p120 Dysfunction in CRCP50CA095103 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COFFEY, ROBERT J. · 2002 to 2017
$33.6M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
The Molecular Functions of APE1 in Barrett's TumorigenesisR01CA206563 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI EL-RIFAI, WAEL · 2015 to 2020
$2.2M
Mechanisms of Tumorigenic Transformation of Barretts EsophagusR01CA206564 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ZAIKA, ALEXANDER I. · 2015 to 2019
$1.8M
Regulation of gastroesophageal reflux-associated tumorigenesisI01BX002115 · VA · VETERANS HEALTH ADMINISTRATION · PI ZAIKA, ALEXANDER I. · 2014 to 2024
–
BLRD VA I01 BX002115NCI NIH HHS P30 CA068485NCI NIH HHS P50 CA095103NCI NIH HHS R01 CA206563NCI NIH HHS R01 CA206564NIDDK NIH HHS P30 DK058404
6 · The paper itself

Abstract

Chronic Gastroesophageal Reflux Disease (GERD) is the main risk factor for the development of Barrett's esophagus (BE) and its progression to esophageal adenocarcinoma (EAC). Accordingly, EAC cells are subjected to high levels of oxidative stress and subsequent DNA damage. In this study, we investigated the expression and role of Apurinic/apyrimidinic endonuclease 1 (APE1) protein in promoting cancer cell survival by counteracting the lethal effects of acidic bile salts (ABS)-induced DNA damage. Immunohistochemistry analysis of human tissue samples demonstrated overexpression of APE1 in more than half of EACs (70 of 130), as compared to normal esophagus and non-dysplastic BE samples (P < 0.01). To mimic in vivo conditions, we treated in vitro cell models with a cocktail of ABS. The knockdown of endogenous APE1 in EAC FLO-1 cells significantly increased oxidative DNA damage (P < 0.01) and DNA single- and double-strand breaks (P < 0.01), whereas overexpression of APE1 in EAC OE33 cells reversed these effects. Annexin V/PI staining indicated that the APE1 expression in OE33 cells protects against ABS-induced apoptosis. In contrast, knockdown of endogenous APE1 in FLO-1 cells increased apoptosis under the same conditions. Mechanistic investigations indicated that the pro-survival function of APE1 was associated with the regulation of stress response c-Jun N-terminal protein kinase (JNK) and p38 kinases. Pharmacological inhibition of APE1 base excision repair (BER) function decreased cell survival and enhanced activation of JNK and p38 kinases by ABS. Our findings suggest that constitutive overexpression of APE1 in EAC may be an adaptive pro-survival mechanism that protects against the genotoxic lethal effects of bile reflux episodes.

Indexed as

AdenocarcinomaBarrett EsophagusBile Acids and SaltsCell Line, TumorCell SurvivalDNA-(Apurinic or Apyrimidinic Site) LyaseDNA DamageDNA RepairEsophageal NeoplasmsGastroesophageal RefluxHumansAPEX1 protein, humanBile Acids and SaltsDNA-(Apurinic or Apyrimidinic Site) Lyaseacidic bile saltsAPE1base excision repairJNKp38

Identifiers

PMID26934647
PMCPMC4941344
OpenAlexW2292142818

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.