Evidence map›Paper›PMID 26934332›Full record

ArticleStem cells (Dayton, Ohio)2016

Genetic Tagging During Human Mesoderm Differentiation Reveals Tripotent Lateral Plate Mesodermal Progenitors.

Chee Jia Chin, Aaron R Cooper, Georgia R Lill, Denis Evseenko, Yuhua Zhu, Chong Bin He, David Casero, Matteo Pellegrini, Donald B Kohn, Gay M Crooks

Abstract read
In one paragraph

Article in Stem cells (Dayton, Ohio), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Trial
  2. Review
  3. Generation of antigen-specific mature T cells from RAG1Nature biomedical engineering · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Chee Jia ChinDepartment of Pathology & Laboratory Medicine, David Geffen School of Medicine (DGSOM).
Aaron R CooperMolecular Biology Interdepartmental PhD Program, DGSOM University of California Los Angeles.
Georgia R LillDepartment of Microbiology, Immunology and Molecular Genetics, DGSOM, DGSOM University of California Los Angeles.
Denis EvseenkoDepartment of Orthopedic Surgery, Keck School of Medicine of University of Southern California (USC). All in, Los Angeles, CA, United States.
Yuhua ZhuDepartment of Pathology & Laboratory Medicine, David Geffen School of Medicine (DGSOM).
Chong Bin HeDepartment of Pathology & Laboratory Medicine, David Geffen School of Medicine (DGSOM).
David CaseroDepartment of Pathology & Laboratory Medicine, David Geffen School of Medicine (DGSOM).
Matteo PellegriniDepartment of Molecular, Cell and Development Biology, DGSOM University of California Los Angeles.
Donald B KohnDepartment of Microbiology, Immunology and Molecular Genetics, DGSOM, DGSOM University of California Los Angeles.
Gay M CrooksDepartment of Pathology & Laboratory Medicine, David Geffen School of Medicine (DGSOM).

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
Transduction of Human Stem and Progenitor CellsP01HL073104 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KOHN, DONALD B · 2003 to 2013
$18.3M
Generation of human chondroprogenitor cells for cartilage restorationK01AR061415 · NIAMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI EVSEENKO, DENIS · 2011 to 2015
$581k
NHLBI NIH HHS P01 HL073104NIAMS NIH HHS K01 AR061415NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

Although clonal studies of lineage potential have been extensively applied to organ specific stem and progenitor cells, much less is known about the clonal origins of lineages formed from the germ layers in early embryogenesis. We applied lentiviral tagging followed by vector integration site analysis (VISA) with high-throughput sequencing to investigate the ontogeny of the hematopoietic, endothelial and mesenchymal lineages as they emerge from human embryonic mesoderm. In contrast to studies that have used VISA to track differentiation of self-renewing stem cell clones that amplify significantly over time, we focused on a population of progenitor clones with limited self-renewal capability. Our analyses uncovered the critical influence of sampling on the interpretation of lentiviral tag sharing, particularly among complex populations with minimal clonal duplication. By applying a quantitative framework to estimate the degree of undersampling we revealed the existence of tripotent mesodermal progenitors derived from pluripotent stem cells, and the subsequent bifurcation of their differentiation into bipotent endothelial/hematopoietic or endothelial/mesenchymal progenitors. Stem Cells 2016;34:1239-1250.

Indexed as

Cell DifferentiationGenetic TechniquesAnimalsAntigens, CDCell LineCell LineageCell SeparationClone CellsFlow CytometryHumansLentivirusMesodermMiceMultipotent Stem CellsAntigens, CDClonal trackingHematopoiesisLentiviral vectorsLineage tracingMesodermPluripotent stem cellsVector integration site analysis

Identifiers

PMID26934332
PMCPMC5052131

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.