Evidence map›Paper›PMID 26933192›Full record

ArticleMolecular & cellular proteomics : MCP2016

An Inducible Retroviral Expression System for Tandem Affinity Purification Mass-Spectrometry-Based Proteomics Identifies Mixed Lineage Kinase Domain-like Protein (MLKL) as an Heat Shock Protein 90 (HSP90) Client.

Johannes W Bigenzahn, Astrid Fauster, Manuele Rebsamen, Richard K Kandasamy, Stefania Scorzoni, Gregory I Vladimer, André C Müller, Matthias Gstaiger, Johannes Zuber, Keiryn L Bennett and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Necroptosis inhibitors: mechanisms of action and therapeutic potential.Apoptosis : an international journal on programmed cell death · 2024
    Review
  3. Review
  4. Necroptosis, the Other Main Caspase-Independent Cell Death.Advances in experimental medicine and biology · 2021
    Article
  5. Review
  6. The Killer Pseudokinase Mixed Lineage Kinase Domain-Like Protein (MLKL).Cold Spring Harbor perspectives in biology · 2020
    Review
  7. Identification of MLKL membrane translocation as a checkpoint in necroptotic cell death using Monobodies.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Necroptosis: Mechanisms and Relevance to Disease.Annual review of pathology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Johannes W BigenzahnFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria;
Astrid FausterFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria;
Manuele RebsamenFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria;
Richard K KandasamyFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria;
Stefania ScorzoniFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria;
Gregory I VladimerFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria;
André C MüllerFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria;
Matthias Gstaiger§Department of Biology, Institute of Mol. Syst. Biol., ETH Zürich, Zürich, Switzerland;
Johannes Zuber¶Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), 1030 Vienna, Austria;
Keiryn L BennettFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria;
Giulio Superti-FurgaFrom the ‡CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria; ‖Center for Physiology and Pharmacology, Medical University of Vienna, Vienna, Austria gsuperti@cemm.oeaw.ac.at.
CeMM Research Center for Molecular Medicine · ATAustrian Academy of Sciences · ATETH Zurich · CHVienna Biocenter · AT

Funding

Austrian Science Fund FWF F 4711
6 · The paper itself

Abstract

Tandem affinity purification-mass spectrometry (TAP-MS) is a popular strategy for the identification of protein-protein interactions, characterization of protein complexes, and entire networks. Its employment in cellular settings best fitting the relevant physiology is limited by convenient expression vector systems. We developed an easy-to-handle, inducible, dually selectable retroviral expression vector allowing dose- and time-dependent control of bait proteins bearing the efficient streptavidin-hemagglutinin (SH)-tag at their N- or C termini. Concomitant expression of a reporter fluorophore allows to monitor bait-expressing cells by flow cytometry or microscopy and enables high-throughput phenotypic assays. We used the system to successfully characterize the interactome of the neuroblastoma RAS viral oncogene homolog (NRAS) Gly12Asp (G12D) mutant and exploited the advantage of reporter fluorophore expression by tracking cytokine-independent cell growth using flow cytometry. Moreover, we tested the feasibility of studying cytotoxicity-mediating proteins with the vector system on the cell death-inducing mixed lineage kinase domain-like protein (MLKL) Ser358Asp (S358D) mutant. Interaction proteomics analysis of MLKL Ser358Asp (S358D) identified heat shock protein 90 (HSP90) as a high-confidence interacting protein. Further phenotypic characterization established MLKL as a novel HSP90 client. In summary, this novel inducible expression system enables SH-tag-based interaction studies in the cell line proficient for the respective phenotypic or signaling context and constitutes a valuable tool for experimental approaches requiring inducible or traceable protein expression.

Indexed as

MutationAnimalsCell LineChromatography, AffinityGenes, ReporterGTP PhosphohydrolasesHEK293 CellsHSP90 Heat-Shock ProteinsHT29 CellsHumansK562 CellsMembrane ProteinsMiceProtein KinasesProteomicsRetroviridaeGTP PhosphohydrolasesHSP90 Heat-Shock ProteinsMembrane ProteinsMLKL protein, humanNRAS protein, humanProtein Kinases

Identifiers

PMID26933192
PMCPMC4813694
OpenAlexW2207684377

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.