Evidence map›Paper›PMID 26932656›Full record

ArticleBMC infectious diseases2016

Hepatitis B infection is highly prevalent among patients presenting with jaundice in Kenya.

Missiani Ochwoto, James H Kimotho, Julius Oyugi, Fredrick Okoth, Henry Kioko, Simeon Mining, Nancy L M Budambula, Elizabeth Giles, Anton Andonov, Elijah Songok and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Missiani OchwotoKenya Medical Research Institute (KEMRI), Nairobi, Kenya. omissiani@gmail.com.
James H KimothoKenya Medical Research Institute (KEMRI), Nairobi, Kenya. JHkimotho@kemri.org.
Julius OyugiMedical Microbiology Department, University of Nairobi, Nairobi, Kenya. julias.oyugi9@gmail.com.
Fredrick OkothKenya Medical Research Institute (KEMRI), Nairobi, Kenya. FOkoth@kemri.org.
Henry KiokoKenyatta National Hospital, Nairobi, Kenya. kiokohenrym@gmail.com.
Simeon MiningMoi University and Moi Teaching and Referral Hospital, Eldoret, Kenya. smining57@gmail.com.
Nancy L M BudambulaJomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya. nbudambula@yahoo.com.
Elizabeth GilesNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Canada. elizabeth.giles@phac-aspc.gc.ca.
Anton AndonovNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Canada. anton.andonov@phac-aspc.gc.ca.
Elijah SongokKenya Medical Research Institute (KEMRI), Nairobi, Kenya. ESongok@kemri.org.
Carla OsiowyNational Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, Canada. carla.osiowy@phac-aspc.gc.ca.
Kenya Medical Research Institute · KEPublic Health Agency of Canada · CAJomo Kenyatta University of Agriculture and Technology · KEKenyatta National Hospital · KEMoi University · KEUniversity of Nairobi · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundViral hepatitis is a major concern worldwide, with hepatitis A (HAV) and E (HEV) viruses showing sporadic outbreaks while hepatitis B (HBV) and C (HCV) viruses are associated with chronic hepatitis, cirrhosis and hepatocellular carcinoma. The present study determined the proportion, geographic distribution and molecular characterization of hepatitis viruses among patients seeking medical services at hospitals throughout Kenya.

methodsPatients presenting with jaundice at four selected hospitals were recruited (n = 389). Sera were tested for the presence of antibody to hepatitis viruses A through E, and HBV surface antigen (HBsAg). Nucleic acid from anti-HAV IgM antibody and HBsAg positive samples was extracted, amplified and sequenced.

resultsChronic HBV infection was the leading cause of morbidity among patients with symptoms of liver disease seeking medical help. Incident HCV, HEV and HDV infection were not detected among the patients in this study, while the proportion of acute HAV was low; HAV IgM positivity was observed in 6.3 % of patients and sequencing revealed that all cases belonged to genotype 1B. HCV seropositivity upon initial screening was 3.9 % but none were confirmed positive by a supplementary immunoblot assay. There was no serological evidence of HDV and acute HEV infection (anti-HEV IgM). HBsAg was found in 50.6 % of the patients and 2.3 % were positive for IgM antibody to the core protein, indicating probable acute infection. HBV genotype A was predominant (90.3 %) followed by D (9.7 %) among HBV DNA positive specimens. Full genome analysis showed HBV/D isolates having similarity to both D4 and D6 subgenotypes and D/E recombinant reference sequences. Two recombinant sequences demonstrated > 4 % nucleotide divergence from other previously known D/E recombinants.

conclusionsHBV is highly prevalent among patients seeking care for symptoms consistent with hepatitis, compared to the general population. Molecular characterization of HBV isolates indicated recombinant strains that may give rise to new circulating variants. There is a need to document the prevalence, clinical manifestation and distribution of the variants observed. HAV genotype 1B, prevalent in Africa, was observed; however, the absence of HCV, HDV and acute HEV in this study does not rule out their presence in Kenya.

Indexed as

AdolescentAdultAgedAged, 80 and overFemaleHepatitis BHepatitis, Viral, HumanHumansJaundiceKenyaMaleMiddle AgedPrevalenceProspective StudiesSeroepidemiologic StudiesYoung Adult

Identifiers

PMID26932656
PMCPMC4774020
OpenAlexW2289346412

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.