Evidence map›Paper›PMID 26930130›Full record

ArticleInorganic chemistry2016

Spectroscopic and Theoretical Study of Cu(I) Binding to His111 in the Human Prion Protein Fragment 106-115.

Trinidad Arcos-López, Munzarin Qayyum, Lina Rivillas-Acevedo, Marco C Miotto, Rafael Grande-Aztatzi, Claudio O Fernández, Britt Hedman, Keith O Hodgson, Alberto Vela, Edward I Solomon and 1 more

Open access · greenAbstract read
In one paragraph

Article in Inorganic chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Mechanism of OACS central science · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Trinidad Arcos-LópezDepartamento de Química, Cinvestav , Gustavo A. Madero, 07360 México.
Munzarin QayyumDepartment of Chemistry, Stanford University , Stanford, California 94395, United States.
Lina Rivillas-AcevedoDepartamento de Química, Cinvestav , Gustavo A. Madero, 07360 México.
Marco C MiottoMax Planck Laboratory for Structural Biology, Chemistry and Molecular Biophysics of Rosario (MPLbioR, UNR-MPIbpC) and Instituto de Investigaciones para el Descubrimiento de Fármacos de Rosario (IIDEFAR, UNR-CONICET), Universidad Nacional de Rosario, Ocampo y Esmeralda , S2002LRK Rosario, Argentina.
Rafael Grande-AztatziDepartamento de Química, Cinvestav , Gustavo A. Madero, 07360 México.
Claudio O FernándezMax Planck Laboratory for Structural Biology, Chemistry and Molecular Biophysics of Rosario (MPLbioR, UNR-MPIbpC) and Instituto de Investigaciones para el Descubrimiento de Fármacos de Rosario (IIDEFAR, UNR-CONICET), Universidad Nacional de Rosario, Ocampo y Esmeralda , S2002LRK Rosario, Argentina.
Britt HedmanStanford Synchrotron Radiation Lightsource (SSRL), SLAC, Stanford University , Menlo Park, California 94025, United States.
Keith O HodgsonDepartment of Chemistry, Stanford University , Stanford, California 94395, United States.
Alberto VelaDepartamento de Química, Cinvestav , Gustavo A. Madero, 07360 México.
Edward I SolomonDepartment of Chemistry, Stanford University , Stanford, California 94395, United States.
Liliana QuintanarDepartamento de Química, Cinvestav , Gustavo A. Madero, 07360 México.
Center for Research and Advanced Studies of the National Polytechnic Institute · MXStanford Synchrotron Radiation Lightsource · USStanford University · USConsejo Nacional de Investigaciones Científicas y Técnicas · ARNational University of Rosario · AR

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Structure/Function Correlations Over Copper EnzymesR01DK031450 · NIDDK · STANFORD UNIVERSITY · PI EDWARD I SOLOMON · 1986 to 2026
$8.7M
SPECTROSCOPIC STUDIES OF COPPER CLUSTERS IN PROTEINSR37DK031450 · NIDDK · STANFORD UNIVERSITY · PI SOLOMON, EDWARD I · 1994 to 2011
$5.7M
NIDDK NIH HHS DK31450NIDDK NIH HHS R01 DK031450NIDDK NIH HHS R37 DK031450NIGMS NIH HHS P41 GM103393NIGMS NIH HHS P41GM103393
6 · The paper itself

Abstract

The ability of the cellular prion protein (PrP(C)) to bind copper in vivo points to a physiological role for PrP(C) in copper transport. Six copper binding sites have been identified in the nonstructured N-terminal region of human PrP(C). Among these sites, the His111 site is unique in that it contains a MKHM motif that would confer interesting Cu(I) and Cu(II) binding properties. We have evaluated Cu(I) coordination to the PrP(106-115) fragment of the human PrP protein, using NMR and X-ray absorption spectroscopies and electronic structure calculations. We find that Met109 and Met112 play an important role in anchoring this metal ion. Cu(I) coordination to His111 is pH-dependent: at pH >8, 2N1O1S species are formed with one Met ligand; in the range of pH 5-8, both methionine (Met) residues bind to Cu(I), forming a 1N1O2S species, where N is from His111 and O is from a backbone carbonyl or a water molecule; at pH <5, only the two Met residues remain coordinated. Thus, even upon drastic changes in the chemical environment, such as those occurring during endocytosis of PrP(C) (decreased pH and a reducing potential), the two Met residues in the MKHM motif enable PrP(C) to maintain the bound Cu(I) ions, consistent with a copper transport function for this protein. We also find that the physiologically relevant Cu(I)-1N1O2S species activates dioxygen via an inner-sphere mechanism, likely involving the formation of a copper(II) superoxide complex. In this process, the Met residues are partially oxidized to sulfoxide; this ability to scavenge superoxide may play a role in the proposed antioxidant properties of PrP(C). This study provides further insight into the Cu(I) coordination properties of His111 in human PrP(C) and the molecular mechanism of oxygen activation by this site.

Indexed as

CopperHumansHydrogen-Ion ConcentrationKineticsModels, TheoreticalNuclear Magnetic Resonance, BiomolecularOxidation-ReductionPeptide FragmentsPrion ProteinsProtein BindingX-Ray Absorption SpectroscopyCopperPeptide FragmentsPrion Proteins

Identifiers

PMID26930130
PMCPMC4804749
OpenAlexW2290661589

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.