Evidence map›Paper›PMID 26929152›Full record

ArticleChembiochem : a European journal of chemical biology2016

Development of Anionically Decorated Caged Neurotransmitters: In Vitro Comparison of 7-Nitroindolinyl- and 2-(p-Phenyl-o-nitrophenyl)propyl-Based Photochemical Probes.

Srinivas Kantevari, Stefan Passlick, Hyung-Bae Kwon, Matthew T Richers, Bernardo L Sabatini, Graham C R Ellis-Davies

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Blue and Green Light Responsive Caged Glutamate.Journal of photochemistry and photobiology. A, Chemistry · 2024
    Article
  2. Review
  3. Article
  4. Optofluidic control of rodent learning using cloaked caged glutamate.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  5. Article
  6. Article
  7. Article
  8. Two-Photon Uncaging of Glutamate.Frontiers in synaptic neuroscience · 2018
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Srinivas KantevariDepartment of Neuroscience, Mount Sinai School of Medicine, New York, NY, 10029, USA) graham.davies at mssm.edu.
Stefan PasslickDepartment of Neuroscience, Mount Sinai School of Medicine, New York, NY, 10029, USA) graham.davies at mssm.edu.
Hyung-Bae KwonDepartment of Neurobiology, Howard Hughes Medical Institute, Harvard Medical School, Cambridge, MA, 02115, USA.
Matthew T RichersDepartment of Neuroscience, Mount Sinai School of Medicine, New York, NY, 10029, USA) graham.davies at mssm.edu.
Bernardo L SabatiniDepartment of Neurobiology, Howard Hughes Medical Institute, Harvard Medical School, Cambridge, MA, 02115, USA.
Graham C R Ellis-DaviesDepartment of Neuroscience, Mount Sinai School of Medicine, New York, NY, 10029, USA) graham.davies at mssm.edu.

Funding

PHOTOCHEMICAL REGULATION OF CALCIUM IN CELL PHYSIOLOGYR01GM053395 · NIGMS · OREGON HEALTH AND SCIENCE UNIVERSITY · PI ELLIS-DAVIES, GRAHAM · 1995 to 2020
$6.1M
Dendritic Ca signals in striatal medium spiny neuronsR01NS046579 · NINDS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI SABATINI, BERNARDO L · 2004 to 2016
$5.0M
Action and interaction of ionotropic and metabotropic neurotransmissionR37NS046579 · NINDS · HARVARD MEDICAL SCHOOL · PI SABATINI, BERNARDO L · 2018 to 2024
$4.6M
Optical probes for controlling cellular functionR01NS069720 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ELLIS-DAVIES, GRAHAM · 2010 to 2017
$3.2M
NIGMS NIH HHS R01 GM053395NINDS NIH HHS R01 NS046579NINDS NIH HHS R01 NS069720NINDS NIH HHS R37 NS046579
6 · The paper itself

Abstract

Neurotransmitter uncaging, especially that of glutamate, has been used to study synaptic function for over 30 years. One limitation of caged glutamate probes is the blockade of γ-aminobutyric acid (GABA)-A receptor function. This problem comes to the fore when the probes are applied at the high concentrations required for effective two-photon photolysis. To mitigate such problems one could improve the photochemical properties of caging chromophores and/or remove receptor blockade. We show that addition of a dicarboxylate unit to the widely used 4-methoxy-7-nitroindolinyl-Glu (MNI-Glu) system reduced the off-target effects by about 50-70 %. When the same strategy was applied to an electron-rich 2-(p-Phenyl-o-nitrophenyl)propyl (PNPP) caging group, the pharmacological improvements were not as significant as in the MNI case. Finally, we used very extensive biological testing of the PNPP-caged Glu (more than 250 uncaging currents at single dendritic spines) to show that nitro-biphenyl caging chromophores have two-photon uncaging efficacies similar to that of MNI-Glu.

Indexed as

AnionsBiphenyl CompoundsGABA-A Receptor AntagonistsGlutamatesIndolesLightMicroscopy, FluorescenceNeurotransmitter AgentsPhotolysisReceptors, GABA-A2-amino-5-(5-((methoxycarbonyl)methyl)-7-nitroindol-1-yl)-5-oxopentanoic acidAnionsBiphenyl CompoundsdcPNPP-GluGABA-A Receptor AntagonistsGlutamatesIndolesNeurotransmitter AgentsReceptors, GABA-Acaged glutamateGABA receptorsneurotransmittersphotolysistwo-photon photolysis

Identifiers

PMID26929152
PMCPMC4870097

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.