Evidence map›Paper›PMID 26928463›Full record

ArticleNature medicine2016

Substantial interindividual and limited intraindividual genomic diversity among tumors from men with metastatic prostate cancer.

Akash Kumar, Ilsa Coleman, Colm Morrissey, Xiaotun Zhang, Lawrence D True, Roman Gulati, Ruth Etzioni, Hamid Bolouri, Bruce Montgomery, Thomas White and 13 more

Abstract read
In one paragraph

Article in Nature medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 499 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
499citing papers in PubMed, 1 pooled it
71.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

499 citing papers in PubMed, 1 synthesis or guideline pooled it, 752 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. SPEN inactivation drives resistance to androgen receptor pathway inhibitors in metastatic prostate cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Article
  6. Article
  7. Science advances · 2026
    Article
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439 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 1 country.

Akash KumarDepartment of Genome Sciences, University of Washington, Seattle, Washington, USA.
Ilsa ColemanDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Colm MorrisseyDepartment of Urology, University of Washington, Seattle, Washington, USA.
Xiaotun ZhangDepartment of Urology, University of Washington, Seattle, Washington, USA.
Lawrence D TrueDepartment of Pathology, University of Washington, Seattle, Washington, USA.
Roman GulatiDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.ORCID http://orcid.org/0000-0002-7592-6567
Ruth EtzioniDivision of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Hamid BolouriDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Bruce MontgomeryDepartment of Medicine, University of Washington, Seattle, Washington, USA.
Thomas WhiteDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Jared M LucasDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Lisha G BrownDepartment of Urology, University of Washington, Seattle, Washington, USA.
Ruth F DumpitDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Navonil DeSarkarDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Celestia HiganoDepartment of Medicine, University of Washington, Seattle, Washington, USA.
Evan Y YuDepartment of Medicine, University of Washington, Seattle, Washington, USA.
Roger ColemanDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Nikolaus SchultzDepartment of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Min FangDepartment of Pathology, University of Washington, Seattle, Washington, USA.
Paul H LangeDepartment of Urology, University of Washington, Seattle, Washington, USA.
Jay ShendureDepartment of Genome Sciences, University of Washington, Seattle, Washington, USA.
Robert L VessellaDepartment of Urology, University of Washington, Seattle, Washington, USA.
Peter S NelsonDepartment of Genome Sciences, University of Washington, Seattle, Washington, USA.
University of Washington · USFred Hutch Cancer Center · USMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
TRANSCRIPTOME AND PROTEOME STRATIFICATION OF PROSTATE ADENOCARCINOMA PHENOTYPESP50CA097186 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI John Kyung Lee · 2002 to 2026
$58.1M
University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
Steroid Metabolism in Castration-Resistant Prostate CancerP01CA163227 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI Steven P. Balk · 2013 to 2026
$25.0M
Transmembrane Proteases and Prostate CarcinogenesisP01CA085859 · NCI · UNIVERSITY OF WASHINGTON · PI VESSELLA, ROBERT LOUIS · 2002 to 2013
$21.2M
NCI NIH HHS P01 CA085859NCI NIH HHS P01 CA163227NCI NIH HHS P01 CA85859NCI NIH HHS P30 CA008748NCI NIH HHS P50 CA097186NIGMS NIH HHS T32 GM007266
6 · The paper itself

Abstract

Tumor heterogeneity may reduce the efficacy of molecularly guided systemic therapy for cancers that have metastasized. To determine whether the genomic alterations in a single metastasis provide a reasonable assessment of the major oncogenic drivers of other dispersed metastases in an individual, we analyzed multiple tumors from men with disseminated prostate cancer through whole-exome sequencing, array comparative genomic hybridization (CGH) and RNA transcript profiling, and we compared the genomic diversity within and between individuals. In contrast to the substantial heterogeneity between men, there was limited diversity among metastases within an individual. The number of somatic mutations, the burden of genomic copy number alterations and aberrations in known oncogenic drivers were all highly concordant, as were metrics of androgen receptor (AR) activity and cell cycle activity. AR activity was inversely associated with cell proliferation, whereas the expression of Fanconi anemia (FA)-complex genes was correlated with elevated cell cycle progression, expression of the E2F transcription factor 1 (E2F1) and loss of retinoblastoma 1 (RB1). Men with somatic aberrations in FA-complex genes or in ATM serine/threonine kinase (ATM) exhibited significantly longer treatment-response durations to carboplatin than did men without defects in genes encoding DNA-repair proteins. Collectively, these data indicate that although exceptions exist, evaluating a single metastasis provides a reasonable assessment of the major oncogenic driver alterations that are present in disseminated tumors within an individual, and thus may be useful for selecting treatments on the basis of predicted molecular vulnerabilities.

Indexed as

AdultAgedAtaxia Telangiectasia Mutated ProteinsCarboplatinCell ProliferationComparative Genomic HybridizationDNA Copy Number VariationsE2F1 Transcription FactorGene Expression Regulation, NeoplasticGenetic VariationGenome, HumanHumansMaleMiddle AgedNeoplasm MetastasisProstatic NeoplasmsAtaxia Telangiectasia Mutated ProteinsATM protein, humanCarboplatinE2F1 protein, humanE2F1 Transcription FactorReceptors, AndrogenRetinoblastoma Protein

Identifiers

PMID26928463
PMCPMC5045679
OpenAlexW2292362441

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.