Evidence map›Paper›PMID 26927887›Full record

ArticleNature communications2016

Social amoebae trap and kill bacteria by casting DNA nets.

Xuezhi Zhang, Olga Zhuchenko, Adam Kuspa, Thierry Soldati

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 119 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Journal of bacteriology · 2024
    Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Moonlighting chromatin: when DNA escapes nuclear control.Cell death and differentiation · 2023
    Review
  13. Starvation Induces Extracellular Accumulation of Polyphosphate inInternational journal of molecular sciences · 2023
    Article
  14. Review
  15. Article
  16. Article
  17. The Ecology and Evolution of Amoeba-Bacterium Interactions.Applied and environmental microbiology · 2021
    Review
  18. The Role of Neutrophil Extracellular Traps in Periodontitis.Frontiers in cellular and infection microbiology · 2021
    Review
  19. Multiple Origins of Extracellular DNA Traps.Frontiers in immunology · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Xuezhi ZhangDepartment of Biochemistry, Science II, University of Geneva, Geneva 1211, Switzerland.
Olga ZhuchenkoVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030-3498, USA.
Adam KuspaVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030-3498, USA.ORCID http://orcid.org/0000-0002-9156-149X
Thierry SoldatiDepartment of Biochemistry, Science II, University of Geneva, Geneva 1211, Switzerland.ORCID http://orcid.org/0000-0002-2056-7931
Baylor College of Medicine · USUniversity of Geneva · CH

Funding

PROJECT III - Computational Analysis of Phenotypes andP01HD039691 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI SUCGANG, RICHARD · 2001 to 2016
$14.4M
NICHD NIH HHS HD39691NICHD NIH HHS P01 HD039691
6 · The paper itself

Abstract

Extracellular traps (ETs) from neutrophils are reticulated nets of DNA decorated with anti-microbial granules, and are capable of trapping and killing extracellular pathogens. Various phagocytes of mammals and invertebrates produce ETs, however, the evolutionary history of this DNA-based host defence strategy is unclear. Here we report that Sentinel (S) cells of the multicellular slug stage of the social amoeba Dictyostelium discoideum produce ETs upon stimulation with bacteria or lipopolysaccharide in a reactive oxygen species-dependent manner. The production of ETs by S cells requires a Toll/Interleukin-1 receptor domain-containing protein TirA and reactive oxygen species-generating NADPH oxidases. Disruption of these genes results in decreased clearance of bacterial infections. Our results demonstrate that D. discoideum is a powerful model organism to study the evolution and conservation of mechanisms of cell-intrinsic immunity, and suggest that the origin of DNA-based ETs as an innate immune defence predates the emergence of metazoans.

Indexed as

Microbial ViabilityBacteriaDictyosteliumDNAExtracellular TrapsKlebsiella pneumoniaePseudomonas aeruginosaReactive Oxygen SpeciesDNAReactive Oxygen Species

Identifiers

PMID26927887
PMCPMC4773522
OpenAlexW2290211579

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.