Evidence map›Paper›PMID 26927156›Full record

ArticleViruses2016

Monitoring Physiological Changes in Haloarchaeal Cell during Virus Release.

Julija Svirskaitė, Hanna M Oksanen, Rimantas Daugelavičius, Dennis H Bamford

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. The Expanding Diversity of Viruses from Extreme Environments.International journal of molecular sciences · 2024
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Spindle-shaped viruses infect marine ammonia-oxidizing thaumarchaea.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  11. Genes · 2019
    Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Julija SvirskaitėDepartment of Biosciences, Institute of Biotechnology, University of Helsinki, Viikinkaari 9, 00014 Helsinki, Finland. julija.svirskaite@helsinki.fi.
Hanna M OksanenDepartment of Biosciences, Institute of Biotechnology, University of Helsinki, Viikinkaari 9, 00014 Helsinki, Finland. hanna.oksanen@helsinki.fi.
Rimantas DaugelavičiusDepartment of Biochemistry, Vytautas Magnus University, Vileikos g. 8, 44404 Kaunas, Lithuania. r.daugelavicius@gmf.vdu.lt.
Dennis H BamfordDepartment of Biosciences, Institute of Biotechnology, University of Helsinki, Viikinkaari 9, 00014 Helsinki, Finland. dennis.bamford@helsinki.fi.
University of Helsinki · FIVytautas Magnus University · LT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The slow rate of adsorption and non-synchronous release of some archaeal viruses have hindered more thorough analyses of the mechanisms of archaeal virus release. To address this deficit, we utilized four viruses that infect Haloarcula hispanica that represent the four virion morphotypes currently known for halophilic euryarchaeal viruses: (1) icosahedral internal membrane-containing SH1; (2) icosahedral tailed HHTV-1; (3) spindle-shaped His1; and (4) pleomorphic His2. To discern the events occurring as the progeny viruses exit, we monitored culture turbidity, as well as viable cell and progeny virus counts of infected and uninfected cultures. In addition to these traditional metrics, we measured three parameters associated with membrane integrity: the binding of the lipophilic anion phenyldicarbaundecaborane, oxygen consumption, and both intra- and extra-cellular ATP levels.

Indexed as

Virus ReleaseAdenosine TriphosphateArchaeal VirusesBoron CompoundsCell CountCell SurvivalHaloarculaOxygen ConsumptionSpectrophotometryViral LoadAdenosine TriphosphateBoron CompoundsphenyldicarbaundecaboraneHaloarcula hispanicaicosahedral membrane-containing virus SH1icosahedral tailed virus HHTV-1Pleolipoviridaepleomorphic virus His2potentiometrySphaerolipoviridaespindle-shaped virus His1virus life cycle

Identifiers

PMID26927156
PMCPMC4810249
OpenAlexW2279691890

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.