Evidence map›Paper›PMID 26926884›Full record

ArticleTranslational psychiatry2016

Molecular analyses of circadian gene variants reveal sex-dependent links between depression and clocks.

S-q Shi, M J White, H M Borsetti, J S Pendergast, A Hida, C M Ciarleglio, P A de Verteuil, A G Cadar, C Cala, D G McMahon and 3 more

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 73 citations in OpenAlex.

  1. Pooled it
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  7. Embers of the Past: Early Childhood Traumas Interact with Variation inInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 3 countries.

S-q ShiDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
M J WhiteDepartment of Medicine, University of California San Francisco, San Francisco, CA, USA.
H M BorsettiInstituto de Estudios Celulares, Genéticos y Moleculares, Universidad Nacional de Jujuy, Jujuy, Argentina.
J S PendergastDepartment of Biology, University of Kentucky, Lexington, KY, USA.
A HidaDepartment of Psychophysiology, National Institute of Mental Health, Tokyo, Japan.
C M CiarleglioDepartment of Neuroscience, Brown University, Providence, RI, USA.
P A de VerteuilDepartment of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, TN, USA.
A G CadarDepartment of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, TN, USA.
C CalaDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
D G McMahonDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
R C SheltonDepartment of Psychiatry, University of Alabama School of Medicine, Birmingham, AL, USA.
S M WilliamsDepartment of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, OH, USA.
C H JohnsonDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
Vanderbilt University · USBrown University · USCase Western Reserve University · USNational Institute of Mental Health · JPNational University of Jujuy · ARUniversity of Alabama at Birmingham · USUniversity of California, San Francisco · USUniversity of Kentucky · US

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
Quantitative Biology Research InstituteP20GM103534 · NIGMS · DARTMOUTH COLLEGE · PI AMOS, CHRISTOPHER I. · 2012 to 2016
$8.6M
Training In Cardiovascular ResearchT32HL007411 · NHLBI · VANDERBILT UNIVERSITY · PI BECKMAN, JOSHUA A · 1985 to 2020
$7.2M
Research Project: Sensory and Multisensory Contributions to AutismU54HD083211 · NICHD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DYKENS, ELISABETH MAY · 2015 to 2019
$7.1M
Circadian Programs in BacteriaR37GM067152 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2015 to 2024
$4.1M
Circadian Clock Gene Polymorphisms Associated with DepressionR21MH082258 · NIMH · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2009 to 2010
$426k
NCRR NIH HHS UL1 RR024975NCRR NIH HHS UL1 RR024975-01NHLBI NIH HHS T32 HL007411NICHD NIH HHS U54 HD083211NIGMS NIH HHS P20 GM103534NIGMS NIH HHS R37 GM067152NIMH NIH HHS R21 MH082258
6 · The paper itself

Abstract

An extensive literature links circadian irregularities and/or sleep abnormalities to mood disorders. Despite the strong genetic component underlying many mood disorders, however, previous genetic associations between circadian clock gene variants and major depressive disorder (MDD) have been weak. We applied a combined molecular/functional and genetic association approach to circadian gene polymorphisms in sex-stratified populations of control subjects and case subjects suffering from MDD. This approach identified significant sex-dependent associations of common variants of the circadian clock genes hClock, hPer3 and hNpas2 with major depression and demonstrated functional effects of these polymorphisms on the expression or activity of the hCLOCK and hPER3 proteins, respectively. In addition, hCLOCK expression is affected by glucocorticoids, consistent with the sex-dependency of the genetic associations and the modulation of glucocorticoid-mediated stress response, providing a mechanism by which the circadian clock controls outputs that may affect psychiatric disorders. We conclude that genetic polymorphisms in circadian genes (especially hClock and hPer3, where functional assays could be tested) influence risk of developing depression in a sex- and stress-dependent manner. These studies support a genetic connection between circadian disruption and mood disorders, and confirm a key connection between circadian gene variation and major depression.

Indexed as

Circadian ClocksCircadian RhythmFemaleGenetic VariationHumansMajor Depressive DisorderMaleSex Factors

Identifiers

PMID26926884
PMCPMC4872462
OpenAlexW2292067370

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.