Evidence map›Paper›PMID 26926869›Full record

ArticleJournal of biomedical optics2016

Automated classification of optical coherence tomography images of human atrial tissue.

Yu Gan, David Tsay, Syed B Amir, Charles C Marboe, Christine P Hendon

Open access · hybridAbstract read
In one paragraph

Article in Journal of biomedical optics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 60 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Cardiac Adipose Tissue Segmentation via Image-Level Annotations.IEEE journal of biomedical and health informatics · 2023
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Heterogeneity Measurement of Cardiac Tissues Leveraging Uncertainty Information from Image Segmentation.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2020
    Article
  12. Development of a polarized hyperspectral microscope for cardiac fiber orientation imaging.Proceedings of SPIE--the International Society for Optical Engineering · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Optical coherence tomography imaging of cardiac substrates.Quantitative imaging in medicine and surgery · 2019
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Yu GanColumbia University, Department of Electrical Engineering, 500 West 120th Street, New York, New York 10027, United States.
David TsayColumbia NY Presbyterian Hospital, 630 West 168th Street, New York, New York 10032, United States.
Syed B AmirColumbia University, Department of Electrical Engineering, 500 West 120th Street, New York, New York 10027, United States.
Charles C MarboeColumbia University Medical Center, 630 West 168th Street, New York, New York 10032, United States.
Christine P HendonColumbia University, Department of Electrical Engineering, 500 West 120th Street, New York, New York 10027, United States.
Columbia University · USColumbia University Irving Medical Center · USPresbyterian Hospital · US

Funding

High resolution imaging of the myocardiumDP2HL127776 · NHLBI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HENDON, CHRISTINE P · 2014 to 2019
$2.9M
NCCDPHP CDC HHS 1DP2HL127776- 01NHLBI NIH HHS DP2 HL127776
6 · The paper itself

Abstract

Tissue composition of the atria plays a critical role in the pathology of cardiovascular disease, tissue remodeling, and arrhythmogenic substrates. Optical coherence tomography (OCT) has the ability to capture the tissue composition information of the human atria. In this study, we developed a region-based automated method to classify tissue compositions within human atria samples within OCT images. We segmented regional information without prior information about the tissue architecture and subsequently extracted features within each segmented region. A relevance vector machine model was used to perform automated classification. Segmentation of human atrial ex vivo datasets was correlated with trichrome histology and our classification algorithm had an average accuracy of 80.41% for identifying adipose, myocardium, fibrotic myocardium, and collagen tissue compositions.

Indexed as

AgedAlgorithmsCardiac Imaging TechniquesFemaleHeart AtriaHumansImage Processing, Computer-AssistedMaleMiddle AgedTomography, Optical Coherence

Identifiers

PMID26926869
PMCPMC5995000
OpenAlexW2291058175

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.