Evidence map›Paper›PMID 26925876›Full record

ArticleNature communications2016

Synthetic RNA-protein modules integrated with native translation mechanisms to control gene expression in malaria parasites.

Suresh M Ganesan, Alejandra Falla, Stephen J Goldfless, Armiyaw S Nasamu, Jacquin C Niles

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 148 papers.

0numbers the graph read from it
0cells of the map it votes in
148citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

148 citing papers in PubMed.

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  20. Genetic analysis of pyrimidine biosynthetic enzymes inbioRxiv : the preprint server for biology · 2025
    Article

88 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Suresh M GanesanDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, 02139 Massachusetts, USA.
Alejandra FallaDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, 02139 Massachusetts, USA.
Stephen J GoldflessDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, 02139 Massachusetts, USA.
Armiyaw S NasamuDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, 02139 Massachusetts, USA.
Jacquin C NilesDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, 02139 Massachusetts, USA.

Funding

TRAINING GRANTS IN ENVIROMENTAL TOXICOLOGYT32ES007020 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ESSIGMANN, JOHN M · 1985 to 2024
$13.1M
MIT Center for Integrative Synthetic BiologyP50GM098792 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI WEISS, RON · 2013 to 2017
$11.0M
Engineered Regulated RNA Localization and Transport in Biological SystemsDP2OD007124 · OD · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI NILES, JACQUIN C · 2010 to 2010
$2.5M
NIEHS NIH HHS 5-T32-ES007020NIEHS NIH HHS T32 ES007020NIGMS NIH HHS P50 GM098792NIH HHS 1DP2OD007124NIH HHS DP2 OD007124
6 · The paper itself

Abstract

Synthetic posttranscriptional regulation of gene expression is important for understanding fundamental biology and programming new cellular processes in synthetic biology. Previous strategies for regulating translation in eukaryotes have focused on disrupting individual steps in translation, including initiation and mRNA cleavage. In emphasizing modularity and cross-organism functionality, these systems are designed to operate orthogonally to native control mechanisms. Here we introduce a broadly applicable strategy for robustly controlling protein translation by integrating synthetic translational control via a small-molecule-regulated RNA-protein module with native mechanisms that simultaneously regulate multiple facets of cellular RNA fate. We demonstrate that this strategy reduces 'leakiness' to improve overall expression dynamic range, and can be implemented without sacrificing modularity and cross-organism functionality. We illustrate this in Saccharomyces cerevisae and the non-model human malarial parasite, Plasmodium falciparum. Given the limited functional genetics toolkit available for P. falciparum, we establish the utility of this strategy for defining essential genes.

Indexed as

Cloning, MolecularGene Expression RegulationPlasmodium falciparumRecombinant ProteinsRNA Processing, Post-TranscriptionalSaccharomyces cerevisiaeRecombinant Proteins

Identifiers

PMID26925876
PMCPMC4773503

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.