Evidence map›Paper›PMID 26925335›Full record

ArticlePeerJ2016

Problems in using p-curve analysis and text-mining to detect rate of p-hacking and evidential value.

Dorothy V M Bishop, Paul A Thompson

Abstract read
In one paragraph

Article in PeerJ, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 6 syntheses or guidelines pooled it.

  1. Pooled it
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  6. Pooled it
  7. Article
  8. Is There Evidence of P-Hacking in Imaging Research?Canadian Association of Radiologists journal = Journal l'Association canadienne des radiologistes · 2023
    Article
  9. Big little lies: a compendium and simulation ofRoyal Society open science · 2023
    Article
  10. Article
  11. Article
  12. Reproducible research into human chemical communication by cues and pheromones: learning from psychology's renaissance.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  13. Article
  14. Article
  15. P-Hacking Lexical Richness Through Definitions of "Type" and "Token".Studies in health technology and informatics · 2019
    Article
  16. Article
  17. Article
  18. Opinion: Is science really facing a reproducibility crisis, and do we need it to?Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. The earth is flat (PeerJ · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Dorothy V M BishopDepartment of Experimental Psychology, University of Oxford , Oxford , United Kingdom.
Paul A ThompsonDepartment of Experimental Psychology, University of Oxford , Oxford , United Kingdom.

Funding

Wellcome Trust
6 · The paper itself

Abstract

Background. The p-curve is a plot of the distribution of p-values reported in a set of scientific studies. Comparisons between ranges of p-values have been used to evaluate fields of research in terms of the extent to which studies have genuine evidential value, and the extent to which they suffer from bias in the selection of variables and analyses for publication, p-hacking. Methods. p-hacking can take various forms. Here we used R code to simulate the use of ghost variables, where an experimenter gathers data on several dependent variables but reports only those with statistically significant effects. We also examined a text-mined dataset used by Head et al. (2015) and assessed its suitability for investigating p-hacking. Results. We show that when there is ghost p-hacking, the shape of the p-curve depends on whether dependent variables are intercorrelated. For uncorrelated variables, simulated p-hacked data do not give the "p-hacking bump" just below .05 that is regarded as evidence of p-hacking, though there is a negative skew when simulated variables are inter-correlated. The way p-curves vary according to features of underlying data poses problems when automated text mining is used to detect p-values in heterogeneous sets of published papers. Conclusions. The absence of a bump in the p-curve is not indicative of lack of p-hacking. Furthermore, while studies with evidential value will usually generate a right-skewed p-curve, we cannot treat a right-skewed p-curve as an indicator of the extent of evidential value, unless we have a model specific to the type of p-values entered into the analysis. We conclude that it is not feasible to use the p-curve to estimate the extent of p-hacking and evidential value unless there is considerable control over the type of data entered into the analysis. In particular, p-hacking with ghost variables is likely to be missed.

Indexed as

CorrelationGhost variablesp-curvep-hackingPowerReproducibilitySimulationText-mining

Identifiers

PMID26925335
PMCPMC4768688

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.