Evidence map›Paper›PMID 26925154›Full record

ArticleInverse problems in science and engineering2016

Modeling Immune Response to BK Virus Infection and Donor Kidney in Renal Transplant Recipients.

H T Banks, Shuhua Hu, Kathryn Link, Eric S Rosenberg, Sheila Mitsuma, Lauren Rosario

Abstract read
In one paragraph

Article in Inverse problems in science and engineering, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Validated Models of Immune Response to Virus Infection.Current opinion in systems biology · 2018
    Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

H T BanksCenter for Research in Scientific Computation, North Carolina State University, Raleigh, NC 27695-8212 USA.
Shuhua HuCenter for Research in Scientific Computation, North Carolina State University, Raleigh, NC 27695-8212 USA.
Kathryn LinkCenter for Research in Scientific Computation, North Carolina State University, Raleigh, NC 27695-8212 USA.
Eric S RosenbergPartners Human Research Committee, Massachusetts General Hospital, Boston, MA 02114 USA.
Sheila MitsumaPartners Human Research Committee, Massachusetts General Hospital, Boston, MA 02114 USA.
Lauren RosarioPartners Human Research Committee, Massachusetts General Hospital, Boston, MA 02114 USA.

Funding

Mathematical and Statistical Modeling to Inform Design of HIV Clinical TrialsR01AI071915 · NIAID · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI BANKS, H. THOMAS · 2006 to 2012
$4.6M
NIAID NIH HHS R01 AI071915
6 · The paper itself

Abstract

In this paper we develop and validate with bootstrapping techniques a mechanistic mathematical model of immune response to both BK virus infection and a donor kidney based on known and hypothesized mechanisms in the literature. The model presented does not capture all the details of the immune response but possesses key features that describe a very complex immunological process. We then estimate model parameters using a least squares approach with a typical set of available clinical data. Sensitivity analysis combined with asymptotic theory is used to determine the number of parameters that can be reliably estimated given the limited number of observations.

Indexed as

human polyomavirus type 1 (BKV)inverse problemmathematical modelRenal transplantsensitivity analysis

Identifiers

PMID26925154
PMCPMC4767521

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.