Evidence map›Paper›PMID 26924382›Full record

ArticleScientific reports2016

CRISPR/cas9, a novel genomic tool to knock down microRNA in vitro and in vivo.

Hong Chang, Bin Yi, Ruixia Ma, Xiaoguo Zhang, Hongyou Zhao, Yaguang Xi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 126 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
126citing papers in PubMed, 1 pooled it
15.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

126 citing papers in PubMed, 1 synthesis or guideline pooled it, 239 citations in OpenAlex.

  1. Pooled it
  2. Generation ofJBMR plus · 2026
    Article
  3. Article
  4. Review
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  6. Methods to Quantify the MicroRNA and Study Their Role in Genotoxic Stress.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
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  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Article
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  15. Article
  16. Article
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  18. Article
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66 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Hong ChangMitchell Cancer Institute, University of South Alabama, USA.
Bin YiMitchell Cancer Institute, University of South Alabama, USA.
Ruixia MaMitchell Cancer Institute, University of South Alabama, USA.
Xiaoguo ZhangMitchell Cancer Institute, University of South Alabama, USA.
Hongyou ZhaoMitchell Cancer Institute, University of South Alabama, USA.
Yaguang XiMitchell Cancer Institute, University of South Alabama, USA.
University of South Alabama · USUSA Mitchell Cancer Institute · US

Funding

MicroRNA and colorectal cancer chemopreventionR01CA192395 · NCI · UNIVERSITY OF SOUTH ALABAMA · PI XI, YAGUANG · 2015 to 2019
$1.9M
MicroRNA, a new player for the NSAID sulindac to prevent colon cancer progressionR21CA182754 · NCI · UNIVERSITY OF SOUTH ALABAMA · PI XI, YAGUANG · 2014 to 2015
$358k
NCI NIH HHS 1R21CA182754NCI NIH HHS R01 CA192395NCI NIH HHS R01CA192395NCI NIH HHS R21 CA182754
6 · The paper itself

Abstract

MicroRNAs are small and non-coding RNA molecules with the master role in regulation of gene expression at post-transcriptional/translational levels. Many methods have been developed for microRNA loss-of-function study, such as antisense inhibitors and sponges; however, the robustness, specificity, and stability of these traditional strategies are not highly satisfied. CRISPR/cas9 system is emerging as a novel genome editing tool in biology/medicine research, but its indication in microRNA research has not been studied exclusively. In this study, we clone CRISPR/cas9 constructs with single-guide RNAs specifically targeting biogenesis processing sites of selected microRNAs; and we find that CRISPR/cas9 can robustly and specifically reduce the expression of these microRNAs up to 96%. CRISPR/cas9 also shows an exclusive benefit in control of crossing off-target effect on microRNAs in the same family or with highly conserved sequences. More significantly, for the first time, we demonstrate the long term stability of microRNA knockdown phenotype by CRISPR/cas9 in both in vitro and in vivo models.

Indexed as

CRISPR-Cas SystemsGene Knockdown TechniquesGene TargetingAnimalsBase SequenceCell LineGene EditingGenomicsHumansINDEL MutationMiceMicroRNAsPhenotypeRNA EditingRNA, Guide, CRISPR-Cas SystemsRNA StabilityMicroRNAsRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID26924382
PMCPMC4770416
OpenAlexW2325637194

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.