Evidence map›Paper›PMID 26923784›Full record

ArticleCurrent biology : CB2016

A Combinatorial Kin Discrimination System in Bacillus subtilis.

Nicholas A Lyons, Barbara Kraigher, Polonca Stefanic, Ines Mandic-Mulec, Roberto Kolter

Abstract read
In one paragraph

Article in Current biology : CB, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed.

  1. Article
  2. Journal of bacteriology · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. The Utilization ofMicroorganisms · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. The putative role of the epipeptide EpeX inMicrobiology (Reading, England) · 2023
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Occurrence of phenotypic variation inBiotechnology reports (Amsterdam, Netherlands) · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Nicholas A LyonsDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115, USA. Electronic address: nicholas_lyons@hms.harvard.edu.
Barbara KraigherBiotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Polonca StefanicBiotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Ines Mandic-MulecBiotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Roberto KolterDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115, USA. Electronic address: roberto_kolter@hms.harvard.edu.

Funding

MOLECULAR GENETICS OF BIOFILM FORMATIONR01GM058213 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI RUDNER, DAVID Z · 1998 to 2017
$7.5M
NIGMS NIH HHS GM058213NIGMS NIH HHS R01 GM058213
6 · The paper itself

Abstract

Multicellularity inherently involves a number of cooperative behaviors that are potentially susceptible to exploitation but can be protected by mechanisms such as kin discrimination. Discrimination of kin from non-kin has been observed in swarms of the bacterium Bacillus subtilis, but the underlying molecular mechanism has been unknown. We used genetic, transcriptomic, and bioinformatic analyses to uncover kin recognition factors in this organism. Our results identified many molecules involved in cell-surface modification and antimicrobial production and response. These genes varied significantly in expression level and mutation phenotype among B. subtilis strains, suggesting interstrain variation in the exact kin discrimination mechanism used. Genome analyses revealed a substantial diversity of antimicrobial genes present in unique combinations in different strains, with many likely acquired by horizontal gene transfer. The dynamic combinatorial effect derived from this plethora of kin discrimination genes creates a tight relatedness cutoff for cooperation that has likely led to rapid diversification within the species. Our data suggest that genes likely originally selected for competitive purposes also generate preferential interactions among kin, thus stabilizing multicellular lifestyles.

Indexed as

Gene Expression Regulation, BacterialGenome, BacterialAdenosine TriphosphatasesAntigens, BacterialATP-Binding Cassette TransportersBacillus subtilisBacterial Physiological PhenomenaBacterial ProteinsDNA Transposable ElementsGene Transfer, HorizontalMicrobial InteractionsMutationPhenotypeSigma FactorAdenosine TriphosphatasesAntigens, BacterialATP-Binding Cassette TransportersBacterial ProteinsDNA Transposable ElementsPhoR protein, Bacteriaphosphate import ATP-binding protein, BacteriaSigma FactorSigW protein, Bacillus subtiliswapA protein, Bacillus subtilis

Identifiers

PMID26923784
PMCPMC4803606

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.