Evidence map›Paper›PMID 26923169›Full record

ArticleMitochondrion2016

Oxidative mitochondrial DNA damage in peripheral blood mononuclear cells is associated with reduced volumes of hippocampus and subcortical gray matter in chronically HIV-infected patients.

Kalpana J Kallianpur, Mariana Gerschenson, Brooks I Mitchell, Daniel E LiButti, Tracie M Umaki, Lishomwa C Ndhlovu, Beau K Nakamoto, Dominic C Chow, Cecilia M Shikuma

Open access · greenAbstract read
In one paragraph

Article in Mitochondrion, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.6field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
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  6. Article
  7. Review
  8. Article
  9. Effects of HIV gp120 on Neuroinflammation in Immunodeficient vs. Immunocompetent States.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2021
    Article
  10. Review
  11. Article
  12. Cerebral Vascular Toxicity of Antiretroviral Therapy.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Letter to the Editor.Journal of neurovirology · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Kalpana J KallianpurHawaii Center for AIDS, Department of Medicine, John A. Burns School of Medicine, Honolulu HI 96813, United States. Electronic address: kalpana@hawaii.edu.
Mariana GerschensonDepartment of Cell and Molecular Biology, John A. Burns School of Medicine, Honolulu HI 96813, United States.
Brooks I MitchellDepartment of Tropical Medicine, John A. Burns School of Medicine, Honolulu HI 96813, United States.
Daniel E LiButtiDepartment of Cell and Molecular Biology, John A. Burns School of Medicine, Honolulu HI 96813, United States.
Tracie M UmakiHawaii Center for AIDS, Department of Medicine, John A. Burns School of Medicine, Honolulu HI 96813, United States.
Lishomwa C NdhlovuHawaii Center for AIDS, Department of Medicine, John A. Burns School of Medicine, Honolulu HI 96813, United States; Department of Tropical Medicine, John A. Burns School of Medicine, Honolulu HI 96813, United States.
Beau K NakamotoHawaii Center for AIDS, Department of Medicine, John A. Burns School of Medicine, Honolulu HI 96813, United States; Straub Clinics and Hospital, Honolulu HI 96813, United States.
Dominic C ChowHawaii Center for AIDS, Department of Medicine, John A. Burns School of Medicine, Honolulu HI 96813, United States.
Cecilia M ShikumaHawaii Center for AIDS, Department of Medicine, John A. Burns School of Medicine, Honolulu HI 96813, United States.
University of Hawaiʻi at Mānoa · US

Funding

RESEARCH DESIGN AND BIOSTATISTICS COREU54MD007584 · NIMHD · UNIVERSITY OF HAWAII AT MANOA · PI HEDGES, JERRIS ROBERT, MOKUAU, NOREEN · 2012 to 2018
$21.1M
RESEARCH ETHICSU54RR026136 · NCRR · UNIVERSITY OF HAWAII AT MANOA · PI INAZU, JUDITH · 2010 to 2011
$8.5M
Role of Oxidative Stress and Inflammation in HIV Cardiovascular RiskR01HL095135 · NHLBI · UNIVERSITY OF HAWAII AT MANOA · PI SHIKUMA, CECILIA M. · 2008 to 2012
$4.5M
Ferumoxytol-enhanced Imaging and Quantitative Susceptibility Mapping in NeuroAIDSR21NS087951 · NINDS · UNIVERSITY OF HAWAII AT MANOA · PI NAKAMOTO, BEAU KATSUKI · 2015 to 2016
$421k
Intrinsic Functional Connectivity Changes Associated with Insular Atrophy in HIVR21NS080656 · NINDS · UNIVERSITY OF HAWAII AT MANOA · PI KALLIANPUR, KALPANA JULIET · 2013 to 2014
$389k
NCRR NIH HHS U54 RR026136NHLBI NIH HHS R01 HL095135NIMHD NIH HHS U54 MD007584NINDS NIH HHS R21 NS080656NINDS NIH HHS R21 NS087951
6 · The paper itself

Abstract

Cross-sectional relationships were examined between regional brain volumes and mitochondrial DNA (mtDNA) 8-hydroxy-2-deoxyguanosine (8-oxo-dG) in peripheral blood mononuclear cells (PBMCs) of 47 HIV patients [mean age 51years; 81% with HIV RNA ≤50copies/mL] on combination antiretroviral therapy. The gene-specific DNA damage and repair assay measured mtDNA 8-oxo-dG break frequency. Magnetic resonance imaging was performed at 3T. Higher mtDNA 8-oxo-dG was associated with lateral ventricular enlargement and with decreased volumes of hippocampus, pallidum, and total subcortical gray matter, suggesting the involvement of systemic mitochondrial-specific oxidative stress in chronic HIV-related structural brain changes and cognitive difficulties. Clarification of the mechanism may provide potential therapeutic targets.

Indexed as

8-Hydroxy-2'-DeoxyguanosineAdultAtrophyCross-Sectional StudiesDeoxyguanosineDNA DamageDNA, MitochondrialFemaleGray MatterHippocampusHIV InfectionsHumansLeukocytes, MononuclearMagnetic Resonance ImagingMaleMiddle Aged8-Hydroxy-2'-DeoxyguanosineDeoxyguanosineDNA, MitochondrialReactive Oxygen SpeciesAtrophyBrainNeuroinflammationOxidative stressPallidumROS

Identifiers

PMID26923169
PMCPMC4877028
OpenAlexW2275681757

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.