Evidence map›Paper›PMID 26922889›Full record

ArticleBMC gastroenterology2016

Does the intestinal microbial community of Korean Crohn's disease patients differ from that of western patients?

Chang Soo Eun, Min-Jung Kwak, Dong Soo Han, A Reum Lee, Dong Il Park, Suk-Kyun Yang, Yong Seok Kim, Jihyun F Kim

Open access · goldAbstract read
In one paragraph

Article in BMC gastroenterology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 2 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 2 syntheses or guidelines pooled it, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Chang Soo EunDepartment of Internal Medicine, Hanyang University Guri Hospital, Guri, Korea.
Min-Jung KwakDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, Korea.
Dong Soo HanDepartment of Internal Medicine, Hanyang University Guri Hospital, Guri, Korea. hands@hanyang.ac.kr.
A Reum LeeDepartment of Internal Medicine, Hanyang University Guri Hospital, Guri, Korea.
Dong Il ParkDepartment of Internal Medicine, Sungkyunkwan University, Seoul, Korea.
Suk-Kyun YangDepartment of Internal Medicine, Ulsan University, Seoul, Korea.
Yong Seok KimDepartment of Biochemistry, Hanyang University, Seoul, Korea.
Jihyun F KimDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, Korea.
Hanyang University Guri Hospital · KRYonsei University · KRHanyang University · KRSungkyunkwan University · KRUlsan University Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIntestinal microbiota play an important role in maintaining the homeostasis of the host immune system. To analyze the alteration of the intestinal microbial community structure in Korean Crohn's disease (CD) patients, we performed a comparative metagenomic analysis between healthy people and CD patients using fecal samples and mucosal tissues of ileocecal valve.

methods16S rRNA genes from fecal samples or mucosal tissues of 35 CD patients and 15 healthy controls (HC) were amplified using a universal primer set and sequenced with GS FLX Titanium. The microbial composition and diversity of each sample were analyzed with the mothur pipeline, and the association between microbial community and clinical characteristics of the patients were investigated.

resultsThe contribution of bacterial groups to the intestinal microbial composition differed between CD and HC, especially in fecal samples. Global structure and individual bacterial abundance of intestinal microbial community were different between feces and ileocecal tissues in HC. In CD patients with active stage, relative abundances of Gammaproteobacteria and Fusobacteria were higher in both fecal and mucosal tissue samples. Moreover, the intestinal microbial community structure was altered by anti-tumor necrosis factor (anti-TNF) treatment.

conclusionsOur 16S rRNA sequence data demonstrate intestinal dysbiosis at the community level in Korean CD patients, which is similar to alterations of the intestinal microbial community seen in the western counterparts. Clinical disease activity and anti-TNF treatment might affect the intestinal microbial community structure in CD patients.

Indexed as

AcidobacteriaActinobacteriaAdultAnti-Inflammatory Agents, Non-SteroidalAsian PeopleAzathioprineBacillotaBacteroidetesCase-Control StudiesCrohn DiseaseDNA, RibosomalDysbiosisFecesFemaleFusobacteriaGammaproteobacteriaAnti-Inflammatory Agents, Non-SteroidalAzathioprineDNA, RibosomalGastrointestinal AgentsImmunosuppressive AgentsInfliximabMesalaminePrednisoloneRNA, Ribosomal, 16STumor Necrosis Factor-alpha

Identifiers

PMID26922889
PMCPMC4770608
OpenAlexW2290974847

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.