Evidence map›Paper›PMID 26921425›Full record

ArticleApplied and environmental microbiology2016

Environmental Contamination in Households of Patients with Recurrent Clostridium difficile Infection.

Megan K Shaughnessy, Aleh Bobr, Michael A Kuskowski, Brian D Johnston, Michael J Sadowsky, Alexander Khoruts, James R Johnson

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 2 pooled it
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 2 syntheses or guidelines pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Molecular epidemiology ofFrontiers in public health · 2022
    Article
  5. Article
  6. Genomic Determination of Relative Risks for Clostridioides difficile Infection From Asymptomatic Carriage in Intensive Care Unit Patients.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  7. Review
  8. Article
  9. Article
  10. Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz · 2020
    Article
  11. Hospital Infection Control:Clinics in colon and rectal surgery · 2020
    Review
  12. Review
  13. Self-disinfecting surfaces and infection control.Colloids and surfaces. B, Biointerfaces · 2019
    Review
  14. Article
  15. Genomic Delineation of Zoonotic Origins ofFrontiers in public health · 2019
    Review
  16. Understanding Clostridium difficile Colonization.Clinical microbiology reviews · 2018
    Review
  17. Article
  18. Observational
  19. Article
  20. Community Environmental Contamination of ToxigenicOpen forum infectious diseases · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Megan K ShaughnessyDepartment of Medicine, Division of Infectious Diseases, University of Minnesota, Minneapolis, Minnesota, USA megan.shaughnessy@hcmed.org johns007@umn.edu.
Aleh BobrBioTechnology Institute, University of Minnesota, St. Paul, Minnesota, USA.
Michael A KuskowskiDepartment of Psychiatry, University of Minnesota, Minneapolis, Minnesota, USA.
Brian D JohnstonDepartment of Medicine, Division of Infectious Diseases, University of Minnesota, Minneapolis, Minnesota, USA.
Michael J SadowskyBioTechnology Institute, University of Minnesota, St. Paul, Minnesota, USA.
Alexander KhorutsDepartment of Medicine, Division of Gastroenterology, University of Minnesota, Minneapolis, Minnesota, USA.
James R JohnsonDepartment of Medicine, Division of Infectious Diseases, University of Minnesota, Minneapolis, Minnesota, USA megan.shaughnessy@hcmed.org johns007@umn.edu.
University of Minnesota · USBiotechnology Institute · USMinneapolis VA Health Care System · US

Funding

Infectious Disease Training in Clinical InvestigationT32AI055433 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI David R Boulware · 2003 to 2026
$6.1M
NIAID NIH HHS T32 AI055433
6 · The paper itself

Abstract

Recurrent Clostridium difficile infection (R-CDI) is common and difficult to treat, potentially necessitating fecal microbiota transplantation (FMT). Although C. difficilespores persist in the hospital environment and cause infection, little is known about their potential presence or importance in the household environment. Households of R-CDI subjects in the peri-FMT period and of geographically matched and age-matched controls were analyzed for the presence ofC. difficile Household environmental surfaces and fecal samples from humans and pets in the household were examined. Households of post-FMT subjects were also examined (environmental surfaces only). Participants were surveyed regarding their personal history and household cleaning habits. Species identity and molecular characteristics of presumptive C. difficile isolates from environmental and fecal samples were determined by using the Pro kit (Remel, USA), Gram staining, PCR, toxinotyping, tcdC gene sequencing, and pulsed-field gel electrophoresis (PFGE). Environmental cultures detected C. difficile on ≥1 surface in 8/8 (100%) peri-FMT households, versus 3/8 (38%) post-FMT households and 3/8 (38%) control households (P= 0.025). The most common C. difficile-positive sites were the vacuum (11/27; 41%), toilet (8/30; 27%), and bathroom sink (5/29; 17%).C. difficile was detected in 3/36 (8%) fecal samples (two R-CDI subjects and one household member). Nine (90%) of 10 households with multiple C. difficile-positive samples had a single genotype present each. In conclusion,C. difficile was found in the household environment of R-CDI patients, but whether it was found as a cause or consequence of R-CDI is unknown. If household contamination leads to R-CDI, effective decontamination may be protective.

Indexed as

Family CharacteristicsAdolescentAdultAgedAged, 80 and overAnimalsClostridioides difficileClostridium InfectionsCross-Sectional StudiesEnvironmental MicrobiologyEnvironmental PollutionFecal Microbiota TransplantationFecesFemaleGenotypeHumans

Identifiers

PMID26921425
PMCPMC4836413
OpenAlexW132378795

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.