Evidence map›Paper›PMID 26921316›Full record

ArticleThe Journal of biological chemistry2016

Aspartate Rescues S-phase Arrest Caused by Suppression of Glutamine Utilization in KRas-driven Cancer Cells.

Deven Patel, Deepak Menon, Elyssa Bernfeld, Victoria Mroz, Sampada Kalan, Diego Loayza, David A Foster

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 87 citations in OpenAlex.

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  19. The mitochondrial CabioRxiv : the preprint server for biology · 2023
    Article
  20. The mitochondrial CaFrontiers in cell and developmental biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Deven PatelFrom the Department of Biological Sciences, Hunter College of the City University of New York, New York, New York 10065, Biochemistry Program and.
Deepak MenonFrom the Department of Biological Sciences, Hunter College of the City University of New York, New York, New York 10065, Biochemistry Program and.
Elyssa BernfeldFrom the Department of Biological Sciences, Hunter College of the City University of New York, New York, New York 10065, Biochemistry Program and.
Victoria MrozFrom the Department of Biological Sciences, Hunter College of the City University of New York, New York, New York 10065.
Sampada KalanFrom the Department of Biological Sciences, Hunter College of the City University of New York, New York, New York 10065, Biology Program, Graduate Center of the City University of New York, New York, New York 10016, and.
Diego LoayzaFrom the Department of Biological Sciences, Hunter College of the City University of New York, New York, New York 10065, Biochemistry Program and Biology Program, Graduate Center of the City University of New York, New York, New York 10016, and.
David A FosterFrom the Department of Biological Sciences, Hunter College of the City University of New York, New York, New York 10065, Biochemistry Program and Biology Program, Graduate Center of the City University of New York, New York, New York 10016, and Department of Pharmacology, Weill Cornell College of Medicine, New York, New York 10021 foster@genectr.hunter.cuny.edu.
City University of New York · USHunter College · USThe Graduate Center, CUNY · US

Funding

Role of phospholipase D in tumorigenesisR01CA046677 · NCI · HUNTER COLLEGE · PI FOSTER, DAVID A · 1997 to 2014
$3.6M
Dysregulated Metabolic Cell Cycle Checkpoints in Human CancerR01CA179542 · NCI · HUNTER COLLEGE · PI FOSTER, DAVID A · 2014 to 2018
$1.3M
Roles of LIM domain proteins TRIP6 and LPP at telomeres.SC3GM094071 · NIGMS · HUNTER COLLEGE · PI LOAYZA, DIEGO · 2011 to 2014
$455k
NCI NIH HHS R01 CA046677NCI NIH HHS R01 CA179542NIGMS NIH HHS SC3 GM094071
6 · The paper itself

Abstract

During G1-phase of the cell cycle, normal cells respond first to growth factors that indicate that it is appropriate to divide and then later in G1 to the presence of nutrients that indicate sufficient raw material to generate two daughter cells. Dividing cells rely on the "conditionally essential" amino acid glutamine (Q) as an anaplerotic carbon source for TCA cycle intermediates and as a nitrogen source for nucleotide biosynthesis. We previously reported that while non-transformed cells arrest in the latter portion of G1 upon Q deprivation, mutant KRas-driven cancer cells bypass the G1 checkpoint, and instead, arrest in S-phase. In this study, we report that the arrest of KRas-driven cancer cells in S-phase upon Q deprivation is due to the lack of deoxynucleotides needed for DNA synthesis. The lack of deoxynucleotides causes replicative stress leading to activation of the ataxia telangiectasia and Rad3-related protein (ATR)-mediated DNA damage pathway, which arrests cells in S-phase. The key metabolite generated from Q utilization was aspartate, which is generated from a transaminase reaction whereby Q-derived glutamate is converted to α-ketoglutarate with the concomitant conversion of oxaloacetate to aspartate. Aspartate is a critical metabolite for both purine and pyrimidine nucleotide biosynthesis. This study identifies the molecular basis for the S-phase arrest caused by Q deprivation in KRas-driven cancer cells that arrest in S-phase in response to Q deprivation. Given that arresting cells in S-phase sensitizes cells to apoptotic insult, this study suggests novel therapeutic approaches to KRas-driven cancers.

Indexed as

Citric Acid CycleS Phase Cell Cycle CheckpointsAspartic AcidAtaxia Telangiectasia Mutated ProteinsG1 Phase Cell Cycle CheckpointsGlutamic AcidHumansMCF-7 CellsProto-Oncogene Proteins p21(ras)Purine NucleotidesPyrimidine NucleotidesAspartic AcidAtaxia Telangiectasia Mutated ProteinsATR protein, humanGlutamic AcidKRAS protein, humanProto-Oncogene Proteins p21(ras)Purine NucleotidesPyrimidine Nucleotidesaspartate (aspartic acid)ATRcell cycleglutamineGTPase Kras (KRAS)KRasnucleotideS-Phase arrest

Identifiers

PMID26921316
PMCPMC4861495
OpenAlexW2277073486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.