Evidence map›Paper›PMID 26918958›Full record

ArticlePloS one2016

Genotype-Specific Interaction of Latent TGFβ Binding Protein 4 with TGFβ.

Kay-Marie Lamar, Tamari Miller, Lisa Dellefave-Castillo, Elizabeth M McNally

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Elastic Fibre Proteins in Elastogenesis and Wound Healing.International journal of molecular sciences · 2022
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Non-Glycanated Biglycan and LTBP4: Leveraging the extracellular matrix for Duchenne Muscular Dystrophy therapeutics.Matrix biology : journal of the International Society for Matrix Biology · 2018
    Review
  10. Review
  11. Article
  12. Outside in: The matrix as a modifier of muscular dystrophy.Biochimica et biophysica acta. Molecular cell research · 2017
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kay-Marie LamarDepartment of Human Genetics, The University of Chicago, Chicago, Illinois, United States of America.
Tamari MillerDepartment of Human Genetics, The University of Chicago, Chicago, Illinois, United States of America.
Lisa Dellefave-CastilloCenter for Genetic Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois, United States of America.
Elizabeth M McNallyDepartment of Human Genetics, The University of Chicago, Chicago, Illinois, United States of America.
Northwestern University · USUniversity of Chicago · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
Northwestern University Clinical and Translational Science Institute (NUCATS)UL1TR001422 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI D'AQUILA, RICHARD · 2015 to 2023
$56.8M
MULTIDISCIPLINARY CARDIAC SCIENCEST32HL007381 · NHLBI · UNIVERSITY OF CHICAGO · PI JEANNE M DECARA, Yoav Gilad · 1985 to 2026
$12.5M
SARCOGLYCAN IN MYOPATHY AND MUSCLE MEMBRANE STABILITYR01HL061322 · NHLBI · UNIVERSITY OF CHICAGO · PI MCNALLY, ELIZABETH M · 1999 to 2022
$7.5M
Myoferlin in Muscle Membrane Fusion and RepairR01NS047726 · NINDS · UNIVERSITY OF CHICAGO · PI ALEXIS R. DEMONBREUN, Elizabeth M McNally · 2003 to 2026
$7.2M
Regulation of TGF - (beta) pathways in muscular dystrophy fibrosisP01NS072027 · NINDS · UNIVERSITY OF CHICAGO · PI MCNALLY, ELIZABETH M · 2011 to 2015
$6.2M
Cardiomyopathy Genomes ProjectR01HL128075 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI MCNALLY, ELIZABETH M, NOBREGA, MARCELO A. · 2015 to 2023
$5.3M
Mechanisms of sulfonylurea receptor mediated cardiomyopathyR01HL122109 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI MAKIELSKI, JONATHAN C, MCNALLY, ELIZABETH M · 2015 to 2018
$2.4M
NCATS NIH HHS UL1 TR001422NCI NIH HHS P30 CA060553NHLBI NIH HHS HL128075NHLBI NIH HHS R01 HL061322NHLBI NIH HHS R01 HL122109NHLBI NIH HHS R01 HL128075NHLBI NIH HHS T32 HL007381NINDS NIH HHS NS047726NINDS NIH HHS P01 NS072027NINDS NIH HHS R01 NS047726
6 · The paper itself

Abstract

Latent TGFβ binding proteins are extracellular matrix proteins that bind latent TGFβ to form the large latent complex. Nonsynonymous polymorphisms in LTBP4, a member of the latent TGFβ binding protein gene family, have been linked to several human diseases, underscoring the importance of TGFβ regulation for a range of phenotypes. Because of strong linkage disequilibrium across the LTBP4 gene, humans have two main LTBP4 alleles that differ at four amino acid positions, referred to as IAAM and VTTT for the encoded residues. VTTT is considered the "risk" allele and associates with increased intracellular TGFβ signaling and more deleterious phenotypes in muscular dystrophy and other diseases. We now evaluated LTBP4 nsSNPs in dilated cardiomyopathy, a distinct disorder associated with TGFβ signaling. We stratified based on self-identified ethnicity and found that the LTBP4 VTTT allele is associated with increased risk of dilated cardiomyopathy in European Americans extending the diseases that associate with LTBP4 genotype. However, the association of LTBP4 SNPs with dilated cardiomyopathy was not observed in African Americans. To elucidate the mechanism by which LTBP4 genotype exerts this differential effect, TGFβ's association with LTBP4 protein was examined. LTBP4 protein with the IAAM residues bound more latent TGFβ compared to the LTBP4 VTTT protein. Together these data provide support that LTBP4 genotype exerts its effect through differential avidity for TGFβ accounting for the differences in TGFβ signaling attributed to these two alleles.

Indexed as

AdultAllelesAmino Acid SequenceBlack or African AmericanCardiomyopathy, DilatedChicagoEthnicityEuropeFemaleFetal BloodGene FrequencyGenotypeHaplotypesHEK293 CellsHumansInfant, NewbornLatent TGF-beta Binding ProteinsLTBP4 protein, humanRecombinant Fusion ProteinsTransforming Growth Factor beta1

Identifiers

PMID26918958
PMCPMC4769137
OpenAlexW2287919301

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.