Evidence map›Paper›PMID 26917111›Full record

ArticleNature communications2016

Impact of ribonucleotide incorporation by DNA polymerases β and λ on oxidative base excision repair.

Emmanuele Crespan, Antonia Furrer, Marcel Rösinger, Federica Bertoletti, Elisa Mentegari, Giulia Chiapparini, Ralph Imhof, Nathalie Ziegler, Shana J Sturla, Ulrich Hübscher and 2 more

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
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  7. Article
  8. RNA: a double-edged sword in genome maintenance.Nature reviews. Genetics · 2020
    Review
  9. Impact of 1,The Journal of biological chemistry · 2020
    Article
  10. Review
  11. Article
  12. Article
  13. Unlike theThe Journal of biological chemistry · 2019
    Article
  14. Article
  15. Article
  16. Current perspectives on mechanisms of ribonucleotide incorporation and processing in mammalian DNA.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2019
    Review
  17. Article
  18. Ribonucleotide discrimination by translesion synthesis DNA polymerases.Critical reviews in biochemistry and molecular biology · 2018
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Emmanuele CrespanDNA Enzymology &Molecular Virology Unit, Institute of Molecular Genetics IGM-CNR, via Abbiategrasso 207, I-27100 Pavia, Italy.
Antonia FurrerDepartment of Molecular Mechanisms of Disease, University of Zürich, CH-8057 Zürich, Switzerland.
Marcel RösingerDepartment of Molecular Mechanisms of Disease, University of Zürich, CH-8057 Zürich, Switzerland.
Federica BertolettiDNA Enzymology &Molecular Virology Unit, Institute of Molecular Genetics IGM-CNR, via Abbiategrasso 207, I-27100 Pavia, Italy.
Elisa MentegariDNA Enzymology &Molecular Virology Unit, Institute of Molecular Genetics IGM-CNR, via Abbiategrasso 207, I-27100 Pavia, Italy.
Giulia ChiappariniDNA Enzymology &Molecular Virology Unit, Institute of Molecular Genetics IGM-CNR, via Abbiategrasso 207, I-27100 Pavia, Italy.
Ralph ImhofDepartment of Molecular Mechanisms of Disease, University of Zürich, CH-8057 Zürich, Switzerland.
Nathalie ZieglerDepartment of Health Sciences and Technology, ETH Zurich, CH-8092 Zürich, Switzerland.
Shana J SturlaDepartment of Health Sciences and Technology, ETH Zurich, CH-8092 Zürich, Switzerland.
Ulrich HübscherDepartment of Molecular Mechanisms of Disease, University of Zürich, CH-8057 Zürich, Switzerland.
Barbara van LoonDepartment of Molecular Mechanisms of Disease, University of Zürich, CH-8057 Zürich, Switzerland.
Giovanni MagaDNA Enzymology &Molecular Virology Unit, Institute of Molecular Genetics IGM-CNR, via Abbiategrasso 207, I-27100 Pavia, Italy.ORCID http://orcid.org/0000-0001-8092-1552

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxidative stress is a very frequent source of DNA damage. Many cellular DNA polymerases (Pols) can incorporate ribonucleotides (rNMPs) during DNA synthesis. However, whether oxidative stress-triggered DNA repair synthesis contributes to genomic rNMPs incorporation is so far not fully understood. Human specialized Pols β and λ are the important enzymes involved in the oxidative stress tolerance, acting both in base excision repair and in translesion synthesis past the very frequent oxidative lesion 7,8-dihydro-8-oxoguanine (8-oxo-G). We found that Pol β, to a greater extent than Pol λ can incorporate rNMPs opposite normal bases or 8-oxo-G, and with a different fidelity. Further, the incorporation of rNMPs opposite 8-oxo-G delays repair by DNA glycosylases. Studies in Pol β- and λ-deficient cell extracts suggest that Pol β levels can greatly affect rNMP incorporation opposite oxidative DNA lesions.

Indexed as

DNA DamageDNA RepairOxidative StressAnimalsCell LineDNA GlycosylasesDNA Polymerase betaGuanineHumansMiceRibonucleotides7,8-dihydro-8-oxoguanineDNA GlycosylasesDNA Polymerase betaDNA polymerase beta2GuanineRibonucleotides

Identifiers

PMID26917111
PMCPMC4773436

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.