Evidence map›Paper›PMID 26916090›Full record

ArticleScientific reports2016

Substrate-dependent dynamics of the multidrug efflux transporter AcrB of Escherichia coli.

Kentaro Yamamoto, Rei Tamai, Megumi Yamazaki, Takehiko Inaba, Yoshiyuki Sowa, Ikuro Kawagishi

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  15. Adaptor protein mediates dynamic pump assembly for bacterial metal efflux.Proceedings of the National Academy of Sciences of the United States of America · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kentaro YamamotoDepartment of Frontier Bioscience, Hosei University, Kajino-cho, Koganei, Tokyo 184-8584.
Rei TamaiDepartment of Frontier Bioscience, Hosei University, Kajino-cho, Koganei, Tokyo 184-8584.
Megumi YamazakiDepartment of Frontier Bioscience, Hosei University, Kajino-cho, Koganei, Tokyo 184-8584.
Takehiko InabaResearch Center for Micro-Nano Technology, Hosei University, Midori-cho, Koganei, Tokyo 184-0003, Japan.
Yoshiyuki SowaDepartment of Frontier Bioscience, Hosei University, Kajino-cho, Koganei, Tokyo 184-8584.
Ikuro KawagishiDepartment of Frontier Bioscience, Hosei University, Kajino-cho, Koganei, Tokyo 184-8584.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The resistance-nodulation-cell division (RND)-type xenobiotic efflux system plays a major role in the multidrug resistance of gram-negative bacteria. The only constitutively expressed RND system of Escherichia coli consists of the inner membrane transporter AcrB, the membrane fusion protein AcrA, and the outer membrane channel TolC. The latter two components are shared with another RND-type transporter AcrD, whose expression is induced by environmental stimuli. Here, we demonstrate how RND-type ternary complexes, which span two membranes and the cell wall, form in vivo. Total internal reflection fluorescence (TIRF) microscopy revealed that most fluorescent foci formed by AcrB fused to green fluorescent protein (GFP) were stationary in the presence of TolC but showed lateral displacements when tolC was deleted. The fraction of stationary AcrB-GFP foci decreased with increasing levels of AcrD. We propose that the AcrB-containing complex becomes unstable upon the induction of AcrD, which presumably replaces AcrB, a process we call "transporter exchange." This instability is suppressed by AcrB-specific substrates, suggesting that the ternary complex is stabilised when it is in action. These results suggest that the assembly of the RND-type efflux system is dynamically regulated in response to external stimuli, shedding new light on the adaptive antibiotic resistance of bacteria.

Indexed as

Drug Resistance, MultipleATP-Binding Cassette, Sub-Family C ProteinsBacterial Outer Membrane ProteinsEscherichia coliEscherichia coli ProteinsMembrane Transport ProteinsMultiprotein ComplexesProtein StabilityAcrB protein, E coliAcrD protein, E coliATP-Binding Cassette, Sub-Family C ProteinsBacterial Outer Membrane ProteinsEscherichia coli ProteinsMembrane Transport ProteinsMultiprotein ComplexestolC protein, E coli

Identifiers

PMID26916090
PMCPMC4768149

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.