Evidence map›Paper›PMID 26914243›Full record

ArticleEnvironmental microbiology2016

Thiosulfate oxidation by Thiomicrospira thermophila: metabolic flexibility in response to ambient geochemistry.

J L Houghton, D I Foustoukos, T M Flynn, C Vetriani, Alexander S Bradley, D A Fike

Open access · greenAbstract read
In one paragraph

Article in Environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A novel bacterial sulfite dehydrogenase that requires threeApplied and environmental microbiology · 2023
    Article
  6. Article
  7. Generation of zero-valent sulfur from dissimilatory sulfate reduction in sulfate-reducing microorganisms.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. Deep-SeamBio · 2022
    Article
  10. Metabolism of the GenusMicroorganisms · 2022
    Article
  11. Article
  12. Article
  13. The Mechanisms of Thiosulfate Toxicity againstAntioxidants (Basel, Switzerland) · 2021
    Article
  14. Article
  15. Characterization ofFrontiers in microbiology · 2021
    Article
  16. Article
  17. Article
  18. New Insights IntoFrontiers in microbiology · 2020
    Article
  19. Elemental Sulfur Formation byFrontiers in microbiology · 2019
    Article
  20. Ecological Succession of Sulfur-OxidizingFrontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

J L HoughtonDepartment of Earth and Planetary Sciences, Washington University, St. Louis, MO, 63130, USA. jhoughton@levee.wustl.edu.
D I FoustoukosGeophysical Laboratory, Carnegie Institution of Washington, Washington, DC, 20015, USA.
T M FlynnBiosciences Division, Argonne National Laboratory, Lemont, IL, 60439, USA.ORCID 0000-0002-1838-8942
C VetrianiDepartment of Biochemistry and Microbiology and Institute of Earth, Ocean and Atmospheric Sciences, Rutgers University, New Brunswick, NJ, 08901, USA.
Alexander S BradleyDepartment of Earth and Planetary Sciences, Washington University, St. Louis, MO, 63130, USA.
D A FikeDepartment of Earth and Planetary Sciences, Washington University, St. Louis, MO, 63130, USA.
Argonne National Laboratory · USCarnegie Institution for Science · USRutgers, The State University of New Jersey · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN · 2001 to 2026
$128.0M
Washington University Institute of Clinical and Translational SciencesUL1TR000448 · NCATS · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2012 to 2016
$41.4M
NCATS NIH HHS UL1 TR000448NCI NIH HHS P30 CA091842
6 · The paper itself

Abstract

Previous studies of the stoichiometry of thiosulfate oxidation by colorless sulfur bacteria have failed to demonstrate mass balance of sulfur, indicating that unidentified oxidized products must be present. Here the reaction stoichiometry and kinetics under variable pH conditions during the growth of Thiomicrospira thermophila strain EPR85, isolated from diffuse hydrothermal fluids at the East Pacific Rise, is presented. At pH 8.0, thiosulfate was stoichiometrically converted to sulfate. At lower pH, the products of thiosulfate oxidation were extracellular elemental sulfur and sulfate. We were able to replicate previous experiments and identify the missing sulfur as tetrathionate, consistent with previous reports of the activity of thiosulfate dehydrogenase. Tetrathionate was formed under slightly acidic conditions. Genomic DNA from T. thermophila strain EPR85 contains genes homologous to those in the Sox pathway (soxAXYZBCDL), as well as rhodanese and thiosulfate dehydrogenase. No other sulfur oxidizing bacteria containing sox(CD)2 genes have been reported to produce extracellular elemental sulfur. If the apparent modified Sox pathway we observed in T. thermophila is present in marine Thiobacillus and Thiomicrospira species, production of extracellular elemental sulfur may be biogeochemically important in marine sulfur cycling.

Indexed as

Bacterial ProteinsOxidation-ReductionOxidesOxidoreductasesSulfurSulfur CompoundsThiobacillusThiosulfatesBacterial ProteinsOxidesOxidoreductasesSulfurSulfur Compoundssulfur monoxidethiosulfate dehydrogenaseThiosulfates

Identifiers

PMID26914243
PMCPMC5335913
OpenAlexW2274503509

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.