Evidence map›Paper›PMID 26913864›Full record

ArticlePhotosynthesis research2016

Architecture of the light-harvesting apparatus of the eustigmatophyte alga Nannochloropsis oceanica.

Radek Litvín, David Bína, Miroslava Herbstová, Zdenko Gardian

Abstract read
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In one paragraph

Article in Photosynthesis research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 55 citations in OpenAlex.

  1. An acetyltransferase family required for biosynthesis of diverse marine carotenoids.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  10. Electronic and Vibrational Properties of Allene Carotenoids.The journal of physical chemistry. A · 2022
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  16. Review
  17. Chlorophyll-carotenoid excitation energy transfer and charge transfer inProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Radek LitvínBiology Centre CAS, Branišovská 31, 370 05, České Budějovice, Czech Republic. litvin@umbr.cas.cz.ORCID http://orcid.org/0000-0001-5272-9029
David BínaBiology Centre CAS, Branišovská 31, 370 05, České Budějovice, Czech Republic.
Miroslava HerbstováBiology Centre CAS, Branišovská 31, 370 05, České Budějovice, Czech Republic.
Zdenko GardianBiology Centre CAS, Branišovská 31, 370 05, České Budějovice, Czech Republic.
University of South Bohemia in České Budějovice · CZSewanee: The University of the South · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present proteomic, spectroscopic, and phylogenetic analysis of light-harvesting protein (Lhc) function in oleaginous Nannochloropsis oceanica (Eustigmatophyta, Stramenopila). N. oceanica utilizes Lhcs of multiple classes: Lhcr-type proteins (related to red algae LHCI), Lhcv (VCP) proteins (violaxanthin-containing Lhcs related to Lhcf/FCP proteins of diatoms), Lhcx proteins (related to Lhcx/LhcSR of diatoms and green algae), and Lhc proteins related to Red-CLH of Chromera velia. Altogether, 17 Lhc-type proteins of the 21 known from genomic data were found in our proteomic analyses. Besides Lhcr-type antennas, a RedCAP protein and a member of the Lhcx protein subfamily were found in association with Photosystem I. The free antenna fraction is formed by trimers of a mixture of Lhcs of varied origins (Lhcv, Lhcr, Lhcx, and relatives of Red-CLH). Despite possessing several proteins of the Red-CLH-type Lhc clade, N. oceanica is not capable of chromatic adaptation under the same conditions as the diatom Phaeodactylum tricornutum or C. velia. In addition, a naming scheme of Nannochloropsis Lhcs is proposed to facilitate further work.

Indexed as

Light-Harvesting Protein ComplexesPhotosystem I Protein ComplexPhylogenySpectrophotometry, UltravioletStramenopilesTandem Mass SpectrometryLight-Harvesting Protein ComplexesPhotosystem I Protein ComplexLight harvestingThylakoid membraneVaucheriaxanthinViolaxanthin–chlorophyll protein

Identifiers

PMID26913864
OpenAlexW2278442642

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.