Evidence map›Paper›PMID 26912909›Full record

ArticleThe Journal of heredity2016

Genetic Structure and Effective Population Sizes in European Red Deer (Cervus elaphus) at a Continental Scale: Insights from Microsatellite DNA.

Frank E Zachos, Alain C Frantz, Ralph Kuehn, Sabine Bertouille, Marc Colyn, Magdalena Niedziałkowska, Javier Pérez-González, Anna Skog, Nikica Sprĕm, Marie-Christine Flamand

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of heredity, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 8 countries.

Frank E ZachosFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Alain C FrantzFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Ralph KuehnFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Sabine BertouilleFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Marc ColynFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Magdalena NiedziałkowskaFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Javier Pérez-GonzálezFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Anna SkogFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Nikica SprĕmFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Marie-Christine FlamandFrom the Natural History Museum Vienna, 1010 Vienna, Austria (Zachos); Musée National d'Histoire Naturelle, L-2160 Münster, Luxembourg (Frantz); Fondation faune-flore, 25, Rue Munster, L-2160 Luxembourg (Frantz); Unit of Molecular Zoology, Chair of Zoology, Department of Animal Science, Technische Universität München, Freising, Germany (Kuehn); Department of Fish, Wildlife and Conservation Ecology, New Mexico State University, Las Cruces, NM 88003-8003, USA (Kuehn); Département de l'Etude du Milieu naturel et agricole, Service Public de Wallonie, 23 Avenue Maréchal Juin, 5030 Gembloux, Belgium (Bertouille); CNRS-UMR 6553, Université de Rennes 1, Station Biologique, 35380 Paimpont, France (Colyn); Mammal Research Institute, Polish Academy of Sciences, Białowieza, Poland (Niedziałkowska); Grupo de Biología y Etología, Universidad de Extremadura, 10071 Cáceres, Spain (Perez-Gonzalez); Department of Biosciences, Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, 0316 Oslo, Norway (Skog); Cancer Registry of Norway, 0304 Oslo, Norway (Skog); Department of Fisheries, Beekeeping, Game Management and Special Zoology, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia (Sprĕm); and Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-15, 1348 Louvain-la-Neuve, Belgium (Flamand).
Centre National de la Recherche Scientifique · FRMusée National d'Histoire Naturelle · LUNatural History Museum Vienna · ATTechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We analyzed more than 600 red deer (Cervus elaphus) from large parts of its European distribution range at 13 microsatellite loci, presenting the first continent-wide study of this species using nuclear markers. Populations were clearly differentiated (overall F ST = 0.166, Jost's D est = 0.385), and the BAPS clustering algorithm yielded mainly geographically limited and adjacent genetic units. When forced into only 3 genetic clusters our data set produced a very similar geographic pattern as previously found in mtDNA phylogeographic studies: a western group from Iberia to central and parts of Eastern Europe, an eastern group from the Balkans to Eastern Europe, and a third group including the threatened relict populations from Sardinia and Mesola in Italy. This result was also confirmed by a multivariate approach to analyzing our data set, a discriminant analysis of principal components. Calculations of genetic diversity and effective population sizes (linkage disequilibrium approach) yielded the lowest results for Italian (Sardinia, Mesola; N e between 2 and 8) and Scandinavian red deer, in line with known bottlenecks in these populations. Our study is the first to present comparative nuclear genetic data in red deer across Europe and may serve as a baseline for future analyses of genetic diversity and structuring in this widespread ungulate.

Indexed as

Genetics, PopulationGenetic VariationMicrosatellite RepeatsAnimalsDeerEuropeGeographyPhylogenyPhylogeographyPopulation DensityCervus elaphuseffective population sizeEuropemicrosatellitesphylogeographyRed deer

Identifiers

PMID26912909
PMCPMC4888435
OpenAlexW2283516699

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