Evidence map›Paper›PMID 26912813›Full record

ArticleMolecular biology and evolution2016

Post-embryonic Hourglass Patterns Mark Ontogenetic Transitions in Plant Development.

Hajk-Georg Drost, Julia Bellstädt, Diarmuid S Ó'Maoiléidigh, Anderson T Silva, Alexander Gabel, Claus Weinholdt, Patrick T Ryan, Bas J W Dekkers, Leónie Bentsink, Henk W M Hilhorst and 4 more

Abstract readLetter
In one paragraph

Article in Molecular biology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  5. Article
  6. Review
  7. Article
  8. The revolutionary developmental biology of Wilhelm His, Sr.Biological reviews of the Cambridge Philosophical Society · 2022
    Review
  9. Theories, laws, and models in evo-devo.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2022
    Review
  10. Article
  11. RNA-Seq Time Series ofPlants (Basel, Switzerland) · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Hajk-Georg DrostInstitute of Computer Science, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany hajk-georg.drost@informatik.uni-halle.de marcel.quint@landw.uni-halle.de.
Julia BellstädtDepartment of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany.
Diarmuid S Ó'MaoiléidighSmurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.
Anderson T SilvaWageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University, Wageningen, The Netherlands.
Alexander GabelInstitute of Computer Science, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Claus WeinholdtInstitute of Computer Science, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Patrick T RyanSmurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.
Bas J W DekkersWageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University, Wageningen, The Netherlands Department of Molecular Plant Physiology, Utrecht University, Utrecht, The Netherlands.
Leónie BentsinkWageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University, Wageningen, The Netherlands Department of Molecular Plant Physiology, Utrecht University, Utrecht, The Netherlands.
Henk W M HilhorstWageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University, Wageningen, The Netherlands.
Wilco LigterinkWageningen Seed Lab, Laboratory of Plant Physiology, Wageningen University, Wageningen, The Netherlands.
Frank WellmerSmurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.
Ivo GrosseInstitute of Computer Science, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.
Marcel QuintDepartment of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany hajk-georg.drost@informatik.uni-halle.de marcel.quint@landw.uni-halle.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The historic developmental hourglass concept depicts the convergence of animal embryos to a common form during the phylotypic period. Recently, it has been shown that a transcriptomic hourglass is associated with this morphological pattern, consistent with the idea of underlying selective constraints due to intense molecular interactions during body plan establishment. Although plants do not exhibit a morphological hourglass during embryogenesis, a transcriptomic hourglass has nevertheless been identified in the model plant Arabidopsis thaliana Here, we investigated whether plant hourglass patterns are also found postembryonically. We found that the two main phase changes during the life cycle of Arabidopsis, from embryonic to vegetative and from vegetative to reproductive development, are associated with transcriptomic hourglass patterns. In contrast, flower development, a process dominated by organ formation, is not. This suggests that plant hourglass patterns are decoupled from organogenesis and body plan establishment. Instead, they may reflect general transitions through organizational checkpoints.

Indexed as

ArabidopsisArabidopsis ProteinsEvolution, MolecularGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantPlant DevelopmentTranscriptomeArabidopsis Proteinsdevelopmental hourglassfloral transition.germinationplant developmenttranscriptomics

Identifiers

PMID26912813
PMCPMC4839224

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.