Evidence map›Paper›PMID 26912755›Full record

ArticleJournal of clinical microbiology2016

Role of Clinicogenomics in Infectious Disease Diagnostics and Public Health Microbiology.

Lars F Westblade, Alex van Belkum, Adam Grundhoff, George M Weinstock, Eric G Pamer, Mark J Pallen, W Michael Dunne

Abstract readConference Proceedings
In one paragraph

Article in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Fluorescent optotracers for bacterial and biofilm detection and diagnostics.Science and technology of advanced materials · 2023
    Review
  5. Microbial signatures of neonatal bacterial meningitis from multiple body sites.Frontiers in cellular and infection microbiology · 2023
    Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Distribution of bacteria infected by metagenomic sequencing technology in maxillofacial space.Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2021
    Article
  11. A case report of pyogenic liver abscess caused by hypervirulentThe Journal of international medical research · 2021
    Article
  12. Precision medicine: Uses and challenges.Medical journal, Armed Forces India · 2021
    Review
  13. Review
  14. Article
  15. A case of pediatric visceral leishmaniasis-related hemophagocytic lymphohistiocytosis diagnosed by mNGS.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2020
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lars F WestbladeDepartment of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, New York, USA.
Alex van BelkumbioMérieux, Inc., LaBalme, France.
Adam GrundhoffHeinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany.
George M WeinstockThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut, USA.
Eric G PamerMemorial Sloan Kettering Cancer Center, New York, New York, USA.
Mark J PallenWarwick Medical School, University of Warwick, Coventry, United Kingdom.
W Michael DunnebioMérieux, Inc., Durham, North Carolina, USA william.dunne@biomerieux.com.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
TNF Mediated Immune Defense Against Listeria InfectionR01AI042135 · NIAID · YALE UNIVERSITY · PI PAMER, ERIC G. · 1998 to 2019
$7.3M
Innate Immune Defense against Clostridium Difficile InfectionR01AI095706 · NIAID · UNIVERSITY OF CHICAGO · PI PAMER, ERIC G. · 2012 to 2020
$3.4M
Biotechnology and Biological Sciences Research CouncilMedical Research CouncilNCI NIH HHS P30 CA008748NIAID NIH HHS R01 AI042135NIAID NIH HHS R01 AI095706
6 · The paper itself

Abstract

Clinicogenomics is the exploitation of genome sequence data for diagnostic, therapeutic, and public health purposes. Central to this field is the high-throughput DNA sequencing of genomes and metagenomes. The role of clinicogenomics in infectious disease diagnostics and public health microbiology was the topic of discussion during a recent symposium (session 161) presented at the 115th general meeting of the American Society for Microbiology that was held in New Orleans, LA. What follows is a collection of the most salient and promising aspects from each presentation at the symposium.

Indexed as

Communicable Disease ControlCommunicable DiseasesGenomicsHumansMicrobiological Techniques

Identifiers

PMID26912755
PMCPMC4922100

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.