Evidence map›Paper›PMID 26912608›Full record

ArticleJournal of virology2016

Membrane Binding of HIV-1 Matrix Protein: Dependence on Bilayer Composition and Protein Lipidation.

Marilia Barros, Frank Heinrich, Siddhartha A K Datta, Alan Rein, Ioannis Karageorgos, Hirsh Nanda, Mathias Lösche

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 67 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Cooperative Membrane Binding of HIV-1 Matrix Proteins.The journal of physical chemistry. B · 2024
    Article
  9. Article
  10. Article
  11. The "basics" of HIV-1 assembly.PLoS pathogens · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Atomic view of the HIV-1 matrix lattice; implications on virus assembly and envelope incorporation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Marilia BarrosDepartment of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.
Frank HeinrichDepartment of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.ORCID http://orcid.org/0000-0002-8579-553X
Siddhartha A K DattaHIV Dynamics and Replication Program, Center for Cancer Research, National Institute of Cancer, Frederick, Maryland, USA.ORCID http://orcid.org/0000-0002-4098-7490
Alan ReinHIV Dynamics and Replication Program, Center for Cancer Research, National Institute of Cancer, Frederick, Maryland, USA reina@mail.nih.gov quench@cmu.edu.
Ioannis KarageorgosBiomolecular Measurement Division, National Institute of Standards and Technology, Gaithersburg, Maryland, USA.ORCID http://orcid.org/0000-0002-2799-766X
Hirsh NandaDepartment of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.
Mathias LöscheDepartment of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA reina@mail.nih.gov quench@cmu.edu.ORCID http://orcid.org/0000-0001-6666-916X
National Institute of Standards and Technology · USCenter for Cancer Research · USCarnegie Mellon University · US

Funding

Retrovirus Assembly and MaturationZIABC010511 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI REIN, ALAN · 2009 to 2025
$9.4M
Membrane Coupling and Dynamic Reorganization of Gag in Viral BuddingR01GM101647 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI LOESCHE, MATHIAS · 2012 to 2015
$1.2M
Intramural NIH HHSNIGMS NIH HHS R01 GM101647NIGMS NIH HHS R01GM101647
6 · The paper itself

Abstract

unlabelledBy assembling in a protein lattice on the host's plasma membrane, the retroviral Gag polyprotein triggers formation of the viral protein/membrane shell. The MA domain of Gag employs multiple signals--electrostatic, hydrophobic, and lipid-specific-to bring the protein to the plasma membrane, thereby complementing protein-protein interactions, located in full-length Gag, in lattice formation. We report the interaction of myristoylated and unmyristoylated HIV-1 Gag MA domains with bilayers composed of purified lipid components to dissect these complex membrane signals and quantify their contributions to the overall interaction. Surface plasmon resonance on well-defined planar membrane models is used to quantify binding affinities and amounts of protein and yields free binding energy contributions, ΔG, of the various signals. Charge-charge interactions in the absence of the phosphatidylinositide PI(4,5)P2 attract the protein to acidic membrane surfaces, and myristoylation increases the affinity by a factor of 10; thus, our data do not provide evidence for a PI(4,5)P2 trigger of myristate exposure. Lipid-specific interactions with PI(4,5)P2, the major signal lipid in the inner plasma membrane, increase membrane attraction at a level similar to that of protein lipidation. While cholesterol does not directly engage in interactions, it augments protein affinity strongly by facilitating efficient myristate insertion and PI(4,5)P2 binding. We thus observe that the isolated MA protein, in the absence of protein-protein interaction conferred by the full-length Gag, binds the membrane with submicromolar affinities. IMPORTANCE: Like other retroviral species, the Gag polyprotein of HIV-1 contains three major domains: the N-terminal, myristoylated MA domain that targets the protein to the plasma membrane of the host; a central capsid-forming domain; and the C-terminal, genome-binding nucleocapsid domain. These domains act in concert to condense Gag into a membrane-bounded protein lattice that recruits genomic RNA into the virus and forms the shell of a budding immature viral capsid. In binding studies of HIV-1 Gag MA to model membranes with well-controlled lipid composition, we dissect the multiple interactions of the MA domain with its target membrane. This results in a detailed understanding of the thermodynamic aspects that determine membrane association, preferential lipid recruitment to the viral shell, and those aspects of Gag assembly into the membrane-bound protein lattice that are determined by MA.

Indexed as

Cell MembraneCholesterolgag Gene Products, Human Immunodeficiency VirusHIV-1HIV AntigensHumansKineticsLipid BilayersLipid-Linked ProteinsLipidsMembrane MicrodomainsMembrane ProteinsPhosphatidylinositol 4,5-DiphosphateProtein BindingCholesterolgag Gene Products, Human Immunodeficiency VirusHIV AntigensLipid BilayersLipid-Linked ProteinsLipidsMembrane Proteinsp17 protein, Human Immunodeficiency Virus Type 1Phosphatidylinositol 4,5-Diphosphate

Identifiers

PMID26912608
PMCPMC4836311
OpenAlexW2276096335

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.