Evidence map›Paper›PMID 26912512›Full record

ArticleAnnals of botany2016

Proteome analysis of digestive fluids in Nepenthes pitchers.

Sandy Rottloff, Sissi Miguel, Flore Biteau, Estelle Nisse, Philippe Hammann, Lauriane Kuhn, Johana Chicher, Vincent Bazile, Laurence Gaume, Benoit Mignard and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
16.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 63 citations in OpenAlex.

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  15. Frontiers in plant science · 2021
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  20. Transcriptomic and Proteomic Analyses ofFrontiers in plant science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Sandy RottloffINRA UMR 1121, Laboratoire Agronomie et Environnement, 2 avenue de la forêt de Haye TSA 40602, F-54518 Vandœuvre-lès-Nancy, France, Université de Lorraine UMR 1121, Laboratoire Agronomie et Environnement, 2 avenue de la forêt de Haye TSA 40602, F-54518 Vandœuvre-lès-Nancy, France, Aura Optik GmbH, Hans-Knöll-Str. 6, D-07745 Jena, Germany.
Sissi MiguelPlant Advanced Technologies SA, 13 Rue du bois de la Champelle, F-54500 Vandœuvre-lès-Nancy, France.
Flore BiteauINRA UMR 1121, Laboratoire Agronomie et Environnement, 2 avenue de la forêt de Haye TSA 40602, F-54518 Vandœuvre-lès-Nancy, France, Université de Lorraine UMR 1121, Laboratoire Agronomie et Environnement, 2 avenue de la forêt de Haye TSA 40602, F-54518 Vandœuvre-lès-Nancy, France.
Estelle NissePlant Advanced Technologies SA, 13 Rue du bois de la Champelle, F-54500 Vandœuvre-lès-Nancy, France.
Philippe HammannPlant Advanced Technologies SA, 13 Rue du bois de la Champelle, F-54500 Vandœuvre-lès-Nancy, France.
Lauriane KuhnProteomic Platform, Institut de Biologie Moléculaire et Cellulaire, CNRS, FRC 1589, 15 rue Descartes, F-67084 Strasbourg cedex, France and.
Johana ChicherProteomic Platform, Institut de Biologie Moléculaire et Cellulaire, CNRS, FRC 1589, 15 rue Descartes, F-67084 Strasbourg cedex, France and.
Vincent BazileUniversité Montpellier II and CNRS, UMR AMAP: Botanique et bioinformatique de l'architecture des plantes, TA A51/PS2, Bd de la Lironde, F-34398 Montpellier cedex 5, France.
Laurence GaumeUniversité Montpellier II and CNRS, UMR AMAP: Botanique et bioinformatique de l'architecture des plantes, TA A51/PS2, Bd de la Lironde, F-34398 Montpellier cedex 5, France.
Benoit MignardPlant Advanced Technologies SA, 13 Rue du bois de la Champelle, F-54500 Vandœuvre-lès-Nancy, France.
Alain HehnINRA UMR 1121, Laboratoire Agronomie et Environnement, 2 avenue de la forêt de Haye TSA 40602, F-54518 Vandœuvre-lès-Nancy, France, Université de Lorraine UMR 1121, Laboratoire Agronomie et Environnement, 2 avenue de la forêt de Haye TSA 40602, F-54518 Vandœuvre-lès-Nancy, France, Alain.Hehn@univ-lorraine.fr.
Frédéric BourgaudINRA UMR 1121, Laboratoire Agronomie et Environnement, 2 avenue de la forêt de Haye TSA 40602, F-54518 Vandœuvre-lès-Nancy, France, Université de Lorraine UMR 1121, Laboratoire Agronomie et Environnement, 2 avenue de la forêt de Haye TSA 40602, F-54518 Vandœuvre-lès-Nancy, France.
Advanced Materials and Technologies (Slovenia) · SICentre National de la Recherche Scientifique · FRDépartement agronomie et sciences de l'environnement pour les agroécosystèmes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsCarnivorous plants have developed strategies to enable growth in nutrient-poor soils. For the genus Nepenthes, this strategy represents producing pitcher-modified leaves that can trap and digest various prey. These pitchers produce a digestive fluid composed of proteins, including hydrolytic enzymes. The focus of this study was on the identification of these proteins.

methodsIn order to better characterize and have an overview of these proteins, digestive fluid was sampled from pitchers at different stages of maturity from five species of Nepenthes (N. mirabilis, N. alata, N. sanguinea, N. bicalcarata and N. albomarginata) that vary in their ecological niches and grew under different conditions. Three complementary approaches based on transcriptomic resources, mass spectrometry and in silico analysis were used. KEY

resultsThis study permitted the identification of 29 proteins excreted in the pitchers. Twenty of these proteins were never reported in Nepenthes previously and included serine carboxypeptidases, α- and β-galactosidases, lipid transfer proteins and esterases/lipases. These 20 proteins display sequence signals allowing their secretion into the pitcher fluid.

conclusionsNepenthes pitcher plants have evolved an arsenal of enzymes to digest prey caught in their traps. The panel of new proteins identified in this study provides new insights into the digestive process of these carnivorous plants.

Indexed as

Amino Acid SequenceComputer SimulationDNA, ComplementaryElectrophoresis, Polyacrylamide GelGene LibraryMolecular Sequence DataPlant ProteinsProteomeProteomicsSarraceniaceaeDNA, ComplementaryPlant ProteinsProteomeCarnivorous plantsdigestive fluidenzymesmass spectrometryNepenthes alataNepenthes albomarginataNepenthes bicalcarataNepenthes mirabilisNepenthes sanguineapitcher plantsproteometranscriptomic analysis

Identifiers

PMID26912512
PMCPMC4765550
OpenAlexW2280208669

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.