Evidence map›Paper›PMID 26911390›Full record

ArticleWorld journal of surgical oncology2016

TNRC9 rs12443621 and FGFR2 rs2981582 polymorphisms and breast cancer risk.

Ying Chen, Chunying Shi, Qiyong Guo

Open access · goldAbstract readComparative Study
In one paragraph

Article in World journal of surgical oncology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Fibroblast growth factor receptor 2 gene (Saudi journal of biological sciences · 2021
    Article
  5. Article
  6. Determination ofDisease markers · 2019
    Article
  7. Article
  8. Article
  9. Association ofOncology letters · 2017
    Article
  10. Fibroblast Growth Factor Receptor 2 Signaling in Breast Cancer.International journal of biological sciences · 2017
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Ying ChenDepartment of Radiology, Shengjing Hospital Affiliated to China Medical University, No. 36, Sanhao ST, Heping District, Shenyang, Liaoning Province, 110004, China. 13039993666@163.com.
Chunying ShiDepartment of Radiology, First Affiliated Hospital of Harbin Medical University, No. 23 Post ST, Nangang District, Harbin, Heilongjiang Province, 150081, China. happy_scy@163.com.
Qiyong GuoDepartment of Radiology, Shengjing Hospital Affiliated to China Medical University, No. 36, Sanhao ST, Heping District, Shenyang, Liaoning Province, 110004, China. chenyinghyd@sina.com.
China Medical University · CNHarbin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis study is to investigate the association of fibroblast growth factor receptor 2 (FGFR2) rs2981582, trinucleotide-repeat-containing 9 (TNRC9) rs3803662, rs12443621, and leukocyte-specific protein 1 (LSP1) rs3817198 polymorphisms with breast cancer and mammographic density in Han Chinese population.

methodsTaqMan Single Nucleotide Polymorphism (SNP) Genotyping Assays and unconditional logistic regression analysis were used to examine these SNPs in 105 breast cancer cases and 382 controls.

resultsThe genotype frequencies of rs12443621 and rs2981582 were significantly different between controls and cases (P=0.017 and 0.006, respectively). Subjects carrying G allele of rs12443621 had increased breast cancer risk (AG vs AA: OR=2.017, 95% CI=0.910-4.471; GG vs AA: OR=2.684, 95% CI=1.318-5.463). Subjects carrying an allele of rs2981582 had reduced breast cancer risk (GA vs GG: OR=0.444, 95% CI=0.262-0.752; AA vs GG: OR=0.579, 95% CI=0.342-0.983). rs3803662 and rs3817198 SNPs did not significantly differ between cases and controls (P=0.408 and 0.116, respectively). Interestingly, the AA genotype of rs2981582 was also associated with reduced mammographic densities (P=0.0092, 95% CI=0.334-0.926).

conclusionsOur findings indicate that the GG genotype of rs12443621 is associated with increased breast cancer risk whereas the GA and AA genotypes of rs2981582 are reduced risk in Han Chinese population.

Indexed as

Apoptosis Regulatory ProteinsBiomarkers, TumorBreast DensityBreast NeoplasmsCase-Control StudiesFemaleFollow-Up StudiesGenetic Predisposition to DiseaseGenotypeHigh Mobility Group ProteinsHumansMammary Glands, HumanMiddle AgedNeoplasm StagingPolymorphism, Single NucleotidePrognosisApoptosis Regulatory ProteinsBiomarkers, TumorFGFR2 protein, humanHigh Mobility Group ProteinsReceptor, Fibroblast Growth Factor, Type 2Receptors, ProgesteroneTOX3 protein, humanTrans-Activators

Identifiers

PMID26911390
PMCPMC4765088
OpenAlexW2284211199

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.