Evidence map›Paper›PMID 26911149›Full record

ArticleParasitology research2016

Evaluation of cellular retinoic acid binding protein 2 gene expression through the retinoic acid pathway by co-incubation of Blastocystis ST-1 with HT29 cells in vitro.

Chen-Chieh Liao, Eing-Ju Song, Tsuey-Yu Chang, Wei-Chen Lin, Hsiao-Sheng Liu, Lih-Ren Chen, Lynn L H Huang, Jyh-Wei Shin

Abstract read
PubMed Publisher
In one paragraph

Article in Parasitology research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact, top 96% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 2 citations in OpenAlex.

  1. Pooled it
  2. Lipid Accumulation inMicroorganisms · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chen-Chieh LiaoInstitute of Biotechnology, College of Bioscience and Biotechnology, National Cheng Kung University, No. l University Road, Tainan City, 701, Taiwan.
Eing-Ju SongDepartment of Bioscience Technology, College of Health Sciences, Chang Jung Christian University, No. 1,Changda Rd.,Gueiren District, Tainan City, 711, Taiwan.
Tsuey-Yu ChangDepartment of Parasitology, Institute of Microbiology and Immunology, College of Medicine, National Cheng Kung University, No. l, University Road, Tainan City, 701, Taiwan.
Wei-Chen LinDepartment of Parasitology, Institute of Microbiology and Immunology, College of Medicine, National Cheng Kung University, No. l, University Road, Tainan City, 701, Taiwan.
Hsiao-Sheng LiuInstitute of Medical Informatics, College of Electrical Engineering and Computer Science, National Cheng Kung University, No. l, University Road, Tainan City, 701, Taiwan.
Lih-Ren ChenInstitute of Biotechnology, College of Bioscience and Biotechnology, National Cheng Kung University, No. l University Road, Tainan City, 701, Taiwan.
Lynn L H HuangInstitute of Biotechnology, College of Bioscience and Biotechnology, National Cheng Kung University, No. l University Road, Tainan City, 701, Taiwan. lynn@mail.ncku.edu.tw.
Jyh-Wei ShinDepartment of Parasitology, Institute of Microbiology and Immunology, College of Medicine, National Cheng Kung University, No. l, University Road, Tainan City, 701, Taiwan. hippo@mail.ncku.edu.tw.
National Cheng Kung University · TWChang Jung Christian University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blastocystis is a parasitic protist with a worldwide distribution that is commonly found in patients with colon and gastrointestinal pathological symptoms. Blastocystis infection has also commonly been reported in colorectal cancer and HIV/AIDS patients with gastrointestinal symptoms. To understand the pathway networks of gene regulation and the probable mechanisms influencing functions of HT-29 host cells in response to parasite infection, we examined the expression of 163 human oncogenes and kinases in human colon adenocarcinoma HT-29 cells co-incubated with Blastocystis by in-house cDNA microarray and PCR analysis. At least 10 genes were shown to be modified following Blastocystis co-incubation, including those with immunological, tumorigenesis, and antitumorigenesis functions. The expression of genes encoding cellular retinoic acid binding protein 2 (CRABP2) and proliferating cell nuclear antigen (PCNA) was markedly upregulated and downregulated, respectively. Reverse transcriptase-PCR validated the modified transcript expression of CRABP2 and other associated genes such as retinoic acid (RA)-related nuclear-receptor (RARα). Together, our data indicate that CRABP2, RARα, and PCNA expressions are involved in RA signaling regulatory networks that affect the growth, proliferation, and inflammation of HT-29 cells.

Indexed as

BlastocystisDown-RegulationGene Expression RegulationHT29 CellsHumansReceptors, Retinoic AcidSignal TransductionTranscriptional ActivationTretinoinUp-RegulationReceptors, Retinoic AcidTretinoinBlastocystisCellular retinoic acid binding protein 2(CRABP2)HT-29 colonic epithelial cellRetinoic acid receptor (RAR)

Identifiers

PMID26911149
OpenAlexW2472370041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.