Evidence map›Paper›PMID 26910529›Full record

ArticlePLoS pathogens2016

Quantitative Proteomics Uncovers Novel Factors Involved in Developmental Differentiation of Trypanosoma brucei.

Mario Dejung, Ines Subota, Ferdinand Bucerius, Gülcin Dindar, Anja Freiwald, Markus Engstler, Michael Boshart, Falk Butter, Christian J Janzen

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 101 citations in OpenAlex.

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  18. Interactions of theParasitology · 2022
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  20. Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Mario DejungInstitute of Molecular Biology (IMB), Ackermannweg 4, Mainz, Germany.
Ines SubotaDepartment of Cell and Developmental Biology, Biocenter, University Wuerzburg, Am Hubland, Wuerzburg, Germany.
Ferdinand BuceriusDepartment Biology I, Genetics, University of Munich (LMU), Großhaderner, Martinsried, Germany.
Gülcin DindarDepartment of Cell and Developmental Biology, Biocenter, University Wuerzburg, Am Hubland, Wuerzburg, Germany.
Anja FreiwaldInstitute of Molecular Biology (IMB), Ackermannweg 4, Mainz, Germany.
Markus EngstlerDepartment of Cell and Developmental Biology, Biocenter, University Wuerzburg, Am Hubland, Wuerzburg, Germany.
Michael BoshartDepartment Biology I, Genetics, University of Munich (LMU), Großhaderner, Martinsried, Germany.
Falk ButterInstitute of Molecular Biology (IMB), Ackermannweg 4, Mainz, Germany.
Christian J JanzenDepartment of Cell and Developmental Biology, Biocenter, University Wuerzburg, Am Hubland, Wuerzburg, Germany.
Institute of Molecular Biology · DELudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Developmental differentiation is a universal biological process that allows cells to adapt to different environments to perform specific functions. African trypanosomes progress through a tightly regulated life cycle in order to survive in different host environments when they shuttle between an insect vector and a vertebrate host. Transcriptomics has been useful to gain insight into RNA changes during stage transitions; however, RNA levels are only a moderate proxy for protein abundance in trypanosomes. We quantified 4270 protein groups during stage differentiation from the mammalian-infective to the insect form and provide classification for their expression profiles during development. Our label-free quantitative proteomics study revealed previously unknown components of the differentiation machinery that are involved in essential biological processes such as signaling, posttranslational protein modifications, trafficking and nuclear transport. Furthermore, guided by our proteomic survey, we identified the cause of the previously observed differentiation impairment in the histone methyltransferase DOT1B knock-out strain as it is required for accurate karyokinesis in the first cell division during differentiation. This epigenetic regulator is likely involved in essential chromatin restructuring during developmental differentiation, which might also be important for differentiation in higher eukaryotic cells. Our proteome dataset will serve as a resource for detailed investigations of cell differentiation to shed more light on the molecular mechanisms of this process in trypanosomes and other eukaryotes.

Indexed as

ProteomicsAmino Acid SequenceAnimalsCell DifferentiationChromatinHistone-Lysine N-MethyltransferaseHistone MethyltransferasesLife Cycle StagesProteomeTrypanosoma brucei bruceiChromatinHistone-Lysine N-MethyltransferaseHistone MethyltransferasesProteome

Identifiers

PMID26910529
PMCPMC4765897
OpenAlexW2281680465

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.